RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 hADV38S2A0JD32 116 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 OR2J3O76001 311 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 NEURL1O76050 574 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 Q56UQ5 140 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 OR1L3Q8NH93 324 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 MARVELD3Q96A59 401 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 ZNF552Q9H707 407 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-201ENST00000302516 FREM3P0C091 2139 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 H3BP45 60 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 APCSP02743 223 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 SRFP11831 508 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 BRS3P32247 399 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 UBE2L3P68036 154 aaKnown RBP6.78□□□□□ -1.32
SF3B3-201ENST00000302516 KIAA0040Q15053 153 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 ANKRD55Q3KP44 614 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 PTCRAQ6ISU1 281 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-201ENST00000302516 ZNF793Q6ZN11 406 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 ASCL5Q7RTU5 278 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 C17orf47Q8NEP4 570 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 PRNDQ9UKY0 176 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 TPRP12270 2363 aaKnown RBP6.78□□□□□ -1.32
SF3B3-201ENST00000302516 CTXND1A0A1B0GTU2 59 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 SH2D7A6NKC9 451 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-201ENST00000302516 RER1O15258 196 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 P01737 135 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 PWWP2BQ6NUJ5 590 aa6.78□□□□□ -1.32
SF3B3-201ENST00000302516 H0Y8X5 98 aa6.77□□□□□ -1.32
SF3B3-201ENST00000302516 CEACAM3P40198 252 aa6.77□□□□□ -1.32
SF3B3-201ENST00000302516 SERF2P84101 59 aa6.77□□□□□ -1.32
SF3B3-201ENST00000302516 TIAL1Q01085 375 aaKnown RBP eCLIP6.77□□□□□ -1.32
SF3B3-201ENST00000302516 SEZ6L2Q6UXD5 910 aa6.77□□□□□ -1.32
SF3B3-201ENST00000302516 ETV3LQ6ZN32 361 aa6.77□□□□□ -1.32
SF3B3-201ENST00000302516 LIPGQ9Y5X9 500 aa6.77□□□□□ -1.32
SF3B3-201ENST00000302516 C7orf66A4D0T2 115 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 RBP4P02753 201 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 POU2F2P09086 479 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 FAM87AP0C7U9 286 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 CDAP32320 146 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 PPP2CBP62714 309 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 PPP2CAP67775 309 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 BATF2Q8N1L9 274 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 ZG16BQ96DA0 208 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 CXXC4Q9H2H0 198 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 PCDHGA9Q9Y5G4 932 aaKnown RBP6.77□□□□□ -1.33
SF3B3-201ENST00000302516 OR3A1P47881 315 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 CLEC18BQ6UXF7 455 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 CADM4Q8NFZ8 388 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 MRM2Q9UI43 246 aaKnown RBP6.77□□□□□ -1.33
SF3B3-201ENST00000302516 ERRFI1Q9UJM3 462 aaPredicted RBP6.77□□□□□ -1.33
SF3B3-201ENST00000302516 HEATR1Q9H583 2144 aaKnown RBP6.77□□□□□ -1.33
SF3B3-201ENST00000302516 CXCL13O43927 109 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 LPAL2Q16609 132 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 IGSF11Q5DX21 431 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 IL36GQ9NZH8 169 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 SPTY2D1-AS1A0A0U1RR47 76 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 POM121BA6NF01 834 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 SYNGR2O43760 224 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 CDKN2AP42771 156 aaKnown RBP6.77□□□□□ -1.33
SF3B3-201ENST00000302516 MISP3Q96FF7 219 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 MIOXQ9UGB7 285 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 ZFP30Q9Y2G7 519 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 H3BQ15 152 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 K7ESF4 209 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 GOSR1O95249 250 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 HPXP02790 462 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 MTURNQ8N3F0 131 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 OR11H7Q8NGC8 314 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 PTP4A1Q93096 173 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 LRRC61Q9BV99 259 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 PRO1933Q9H354 126 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 CTSVO60911 334 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 TCTAP57738 103 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 COL19A1Q14993 1142 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 OR4B1Q8NGF8 309 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 MRPS18AQ9NVS2 196 aaKnown RBP6.77□□□□□ -1.33
SF3B3-201ENST00000302516 CES1P1Q9UKY3 287 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 LBX1P52954 281 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 EIF3IQ13347 325 aaKnown RBP6.77□□□□□ -1.33
SF3B3-201ENST00000302516 C6orf201Q7Z4U5 140 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 STARD4Q96DR4 205 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 TNFSF18Q9UNG2 199 aa6.77□□□□□ -1.33
SF3B3-201ENST00000302516 IGHV3-15A0A0B4J1V0 119 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 BCL2P10415 239 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 COL9A2Q14055 689 aaPredicted RBP6.76□□□□□ -1.33
SF3B3-201ENST00000302516 FAM186AA6NE01 2351 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 CORTO00230 105 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 BMPR1BO00238 502 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 FGF8P55075 233 aaPredicted RBP6.76□□□□□ -1.33
SF3B3-201ENST00000302516 SP6Q3SY56 376 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 OR2Z1Q8NG97 314 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 CHST5Q9GZS9 411 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 TMEM210A6NLX4 147 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 ZNF716A6NP11 495 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 SMPD2O60906 423 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 FCGR3BO75015 233 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 FSTP19883 344 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 YBX1P67809 324 aaKnown RBP6.76□□□□□ -1.33
SF3B3-201ENST00000302516 C12orf54Q6X4T0 127 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 OR4A4PQ8NGN8 299 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 DYRK2Q92630 601 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms