RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 RASL10BQ96S79 203 aa11.96□□□□□ -0.5
CHRFAM7A-201ENST00000299847 HSF4Q9ULV5 492 aa11.96□□□□□ -0.5
CHRFAM7A-201ENST00000299847 COL22A1Q8NFW1 1626 aaPredicted RBP11.96□□□□□ -0.5
CHRFAM7A-201ENST00000299847 NPY1RP25929 384 aa11.96□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CD1BP29016 333 aa11.96□□□□□ -0.5
CHRFAM7A-201ENST00000299847 ACAA2P42765 397 aaKnown RBP11.96□□□□□ -0.5
CHRFAM7A-201ENST00000299847 PSMB2P49721 201 aa11.96□□□□□ -0.5
CHRFAM7A-201ENST00000299847 MRPS11P82912 194 aaKnown RBP11.96□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RNFT1Q5M7Z0 435 aa11.96□□□□□ -0.5
CHRFAM7A-201ENST00000299847 AMMECR1Q9Y4X0 333 aaPredicted RBP11.96□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SPAARA0A1B0GVQ0 90 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 GABRA1P14867 456 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 KIR2DS2P43631 304 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SLC23A3Q6PIS1 610 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 MUC15Q8N387 334 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 C5orf17Q8NAS9 161 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 NUBPLQ8TB37 319 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RAB1BQ9H0U4 201 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 ORM1P02763 201 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CD3EP07766 207 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SRD5A2P31213 254 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 ZNF141Q15928 474 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 MRPL54Q6P161 138 aaKnown RBP11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SOSTQ9BQB4 213 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SH2D2AQ9NP31 389 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TRDCB7Z8K6 153 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 F2RL2O00254 374 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 FFAR1O14842 300 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 ZNF137PP52743 207 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TRA2AQ13595 282 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 ECSCRQ19T08 205 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CXCL3P19876 107 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 IL11P20809 199 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CEBPEQ15744 281 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 IQCJQ1A5X6 159 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SLC17A5Q9NRA2 495 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TCFL5Q9UL49 500 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 PCDHGA9Q9Y5G4 932 aaKnown RBP11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 PRSS1P07477 247 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 INHBBP09529 407 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 BMI1P35226 326 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SULT1A1P50225 295 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 AESQ08117 197 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 MOB1BQ7L9L4 216 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OR8B3Q8NGG8 313 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OR52L2PQ8NGH6 319 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SCMH1Q96GD3 660 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OR8B2Q96RD0 313 aa11.95□□□□□ -0.5
CHRFAM7A-201ENST00000299847 MYH14Q7Z406 1995 aaKnown RBP11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 LINC01387J3KSC0 135 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 UQCC3Q6UW78 93 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TRPM3Q9HCF6 1732 aaPredicted RBP11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 AUP1Q9Y679 476 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RBFOX3A6NFN3 312 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SLC6A1P30531 599 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 LGALS7P47929 136 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 ZIC1Q15915 447 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 FDX2Q6P4F2 183 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 MRPL24Q96A35 216 aaKnown RBP11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 FKBP11Q9NYL4 201 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 MRPS18BQ9Y676 258 aaKnown RBP11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 LOC389332A0A1B0GUA5 103 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 LANCL1O43813 399 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 FGF9P31371 208 aaPredicted RBP11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SKP2Q13309 424 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 PRSS54Q6PEW0 395 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 LILRA6Q6PI73 481 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TMEM116Q8NCL8 245 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 NEIL1Q96FI4 390 aaPredicted RBP11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 LPAR5Q9H1C0 372 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SPINT1O43278 529 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 GSTZ1O43708 216 aaPredicted RBP11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RANP62826 216 aaKnown RBP11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 ZNF770Q6IQ21 691 aaPredicted RBP11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 MRGPRFQ96AM1 343 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 WNT16Q9UBV4 365 aa11.94□□□□□ -0.5
CHRFAM7A-201ENST00000299847 H3BVH4 76 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CLDN34H7C241 214 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 J3QR89 54 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CBLN2Q8IUK8 224 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OR2M3Q8NG83 312 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 DTX4Q9Y2E6 619 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 FAM87AP0C7U9 286 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 ACP1P24666 158 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 IL13RA2Q14627 380 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SPRED2Q7Z698 418 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 ZPLD1Q8TCW7 415 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 COX14Q96I36 57 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RASL11BQ9BPW5 248 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 LIPT2A6NK58 231 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 C11orf94C9JXX5 98 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 SPCS3P61009 180 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 C10orf111Q8N326 155 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 ATP5SQ99766 215 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 IL17BQ9UHF5 180 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 IGHV5-10-1A0A0J9YXX1 117 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 OOEPA6NGQ2 149 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 AWAT1Q58HT5 328 aa11.93□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RBPMS2Q6ZRY4 209 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms