RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 ZNF442Q9H7R0 627 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 ICE1Q9Y2F5 2266 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 DBX1A6NMT0 343 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 OR5H8P0DN80 308 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 RPS2P15880 293 aaKnown RBP18.17■□□□□ 0.5
SOX17-201ENST00000297316 CCKARP32238 428 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 NAAAQ02083 359 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 SRSF4Q08170 494 aaKnown RBP18.17■□□□□ 0.5
SOX17-201ENST00000297316 NHLRC3Q5JS37 347 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 SLC22A25Q6T423 547 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 RELL2Q8NC24 303 aaPredicted RBP18.17■□□□□ 0.5
SOX17-201ENST00000297316 ZCCHC14Q8WYQ9 949 aaKnown RBP18.17■□□□□ 0.5
SOX17-201ENST00000297316 TUBD1Q9UJT1 453 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 SPEF1Q9Y4P9 236 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 TPRP12270 2363 aaKnown RBP18.17■□□□□ 0.5
SOX17-201ENST00000297316 SFT2D2O95562 160 aa18.16■□□□□ 0.5
SOX17-201ENST00000297316 CD8AP01732 235 aa18.16■□□□□ 0.5
SOX17-201ENST00000297316 HLA-GP17693 338 aa18.16■□□□□ 0.5
SOX17-201ENST00000297316 GNG3P63215 75 aa18.16■□□□□ 0.5
SOX17-201ENST00000297316 POLEQ07864 2286 aa18.16■□□□□ 0.5
SOX17-201ENST00000297316 FAM25EA8MYX2 175 aa18.16■□□□□ 0.5
SOX17-201ENST00000297316 TRAPPC2LH3BP13 241 aa18.16■□□□□ 0.5
SOX17-201ENST00000297316 MSMPQ1L6U9 139 aa18.16■□□□□ 0.5
SOX17-201ENST00000297316 TMEM65Q6PI78 240 aa18.16■□□□□ 0.5
SOX17-201ENST00000297316 MKXQ8IYA7 352 aa18.16■□□□□ 0.5
SOX17-201ENST00000297316 OR51I2Q9H344 312 aa18.16■□□□□ 0.5
SOX17-201ENST00000297316 RDH8Q9NYR8 311 aa18.16■□□□□ 0.5
SOX17-201ENST00000297316 OR5B21A6NL26 309 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 HMSDA8MTL9 139 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 IQCF6A8MYZ5 107 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 ANKRD55Q3KP44 614 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 LPCAT3Q6P1A2 487 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 ADAT1Q9BUB4 502 aaKnown RBP18.15■□□□□ 0.5
SOX17-201ENST00000297316 PDCD10Q9BUL8 212 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 C12orf4Q9NQ89 552 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 KIF25Q9UIL4 384 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 COL6A6A6NMZ7 2263 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 RFPL4AA6NLU0 287 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 RFPL4AL1F8VTS6 287 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 HSPB6O14558 160 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 PGAM2P15259 253 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 PRKACAP17612 351 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 RBMXP38159 391 aaKnown RBP18.15■□□□□ 0.5
SOX17-201ENST00000297316 LRRC37A5PQ49AS3 106 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 ASB13Q8WXK3 278 aa18.15■□□□□ 0.5
SOX17-201ENST00000297316 RBPMSQ93062 196 aaKnown RBP18.15■□□□□ 0.5
SOX17-201ENST00000297316 SMG1Q96Q15 3661 aaKnown RBP18.14■□□□□ 0.49
SOX17-201ENST00000297316 TUBAL3A6NHL2 446 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 KNG1P01042 644 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.14■□□□□ 0.49
SOX17-201ENST00000297316 MUCL1Q96DR8 90 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 SCGB3A2Q96PL1 93 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 NECAP2Q9NVZ3 263 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 COQ3Q9NZJ6 369 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 RCC2Q9P258 522 aaKnown RBP18.14■□□□□ 0.49
SOX17-201ENST00000297316 PURGQ9UJV8 347 aaKnown RBP18.14■□□□□ 0.49
SOX17-201ENST00000297316 FAM90A10PA6NDY2 464 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 FAM90A18PA6NE21 464 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 FAM90A16PA6NEW6 464 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 FAM90A20PA6NIJ5 464 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 FAM90A8PA6NJQ4 464 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 FAM90A7PA6NKC0 464 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 FAM90A22PA8MWA6 464 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 FAM90A12PA8MX19 464 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 FAM90A5PA8MXJ8 464 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 FAM90A23PA8MXZ1 464 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 MLNRO43193 412 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 FAM90A15PP0C7V4 464 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 FAM90A13PP0C7W8 464 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 FAM90A14PP0C7W9 464 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 FAM90A24PP0C7X0 464 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 ZNF573Q86YE8 665 aa18.14■□□□□ 0.49
SOX17-201ENST00000297316 PLCE1Q9P212 2302 aa18.13■□□□□ 0.49
SOX17-201ENST00000297316 ADAP1O75689 374 aa18.13■□□□□ 0.49
SOX17-201ENST00000297316 MRGPRGQ86SM5 289 aa18.13■□□□□ 0.49
SOX17-201ENST00000297316 FAM169BQ8N8A8 192 aa18.13■□□□□ 0.49
SOX17-201ENST00000297316 WDR13Q9H1Z4 485 aa18.13■□□□□ 0.49
SOX17-201ENST00000297316 MSL2Q9HCI7 577 aa18.13■□□□□ 0.49
SOX17-201ENST00000297316 SERPINF1P36955 418 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 GMFBP60983 142 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 HOXA4Q00056 320 aaPredicted RBP18.12■□□□□ 0.49
SOX17-201ENST00000297316 KLRB1Q12918 225 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 IL24Q13007 206 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 SURF2Q15527 256 aaPredicted RBP18.12■□□□□ 0.49
SOX17-201ENST00000297316 TMEM211Q6ICI0 200 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 Q6ZR03 302 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 TMUB2Q71RG4 321 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 LRP11Q86VZ4 500 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 PPP1R1CQ8WVI7 109 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 RTL8AQ9BWD3 113 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 BCL2L14Q9BZR8 327 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 ZNF286AQ9HBT8 521 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 DECR2Q9NUI1 292 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 CHD3Q12873 2000 aaKnown RBP18.12■□□□□ 0.49
SOX17-201ENST00000297316 TRGV8A0A0C4DH27 118 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 hCG_1807616A0A1W2PRN6 198 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 MPTX1A8MV57 137 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 S100A11P31949 105 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 PMELP40967 661 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 RBPJQ06330 500 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms