RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 KIAA0141Q14154 515 aaPredicted RBP15.5■□□□□ 0.07
CDC42EP3-201ENST00000295324 DBX2Q6ZNG2 339 aa15.5■□□□□ 0.07
CDC42EP3-201ENST00000295324 BOLA1Q9Y3E2 137 aa15.5■□□□□ 0.07
CDC42EP3-201ENST00000295324 C4orf51C9J302 202 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 MRGPRGQ86SM5 289 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 RASL11BQ9BPW5 248 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 PARP12Q9H0J9 701 aaKnown RBP15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 FOXD3Q9UJU5 478 aaPredicted RBP15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 ABCA7Q8IZY2 2146 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 TUBGCP6Q96RT7 1819 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 NDUFB6O95139 128 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 TGIF2LYQ8IUE0 185 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 TGIF2LXQ8IUE1 241 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 AKIP1Q9NQ31 210 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 C3orf85A0A1B0GTC6 90 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 PTHLHP12272 177 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 RIPPLY2Q5TAB7 128 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 ZBTB37Q5TC79 503 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 HIST2H3AQ71DI3 136 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 C14orf79Q96F83 325 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 GPR27Q9NS67 375 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 RRASP10301 218 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 ASCL1P50553 236 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 PDZK1IP1Q13113 114 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 LINC00596Q86U02 117 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 TMED6Q8WW62 240 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 RAB40CQ96S21 281 aa15.49■□□□□ 0.07
CDC42EP3-201ENST00000295324 LGALS7P47929 136 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 TMEM267Q0VDI3 215 aaPredicted RBP15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 WDFY2Q96P53 400 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 CACNA1GO43497 2377 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 XKRY2A2RUG3 117 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 GEMIN2O14893 280 aaKnown RBP15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 OR13C7P0DN81 318 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 STARD10Q9Y365 291 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 CEP250Q9BV73 2442 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 MVDP53602 400 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 NIT2Q9NQR4 276 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 IGKV3-11P04433 115 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 TMPRSS13Q9BYE2 586 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 SLIRPQ9GZT3 109 aaKnown RBP15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 RASL12Q9NYN1 266 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 ANXA10Q9UJ72 324 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 RNF115Q9Y4L5 304 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 LSM11P83369 360 aaKnown RBP eCLIP15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 CCDC144NLQ6NUI1 221 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 NAA60Q9H7X0 242 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 PRSS50Q9UI38 385 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 INSIG2Q9Y5U4 225 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 URGCP-MRPS24S4R325 110 aa15.48■□□□□ 0.07
CDC42EP3-201ENST00000295324 IFNL4K9M1U5 179 aa15.47■□□□□ 0.07
CDC42EP3-201ENST00000295324 METTL15P1P0C7V9 234 aa15.47■□□□□ 0.07
CDC42EP3-201ENST00000295324 GGTLC2Q14390 218 aa15.47■□□□□ 0.07
CDC42EP3-201ENST00000295324 SPNS3Q6ZMD2 512 aa15.47■□□□□ 0.07
CDC42EP3-201ENST00000295324 UQCC1Q9NVA1 299 aa15.47■□□□□ 0.07
CDC42EP3-201ENST00000295324 BAP18Q8IXM2 172 aa15.47■□□□□ 0.07
CDC42EP3-201ENST00000295324 TMEM147Q9BVK8 224 aa15.47■□□□□ 0.07
CDC42EP3-201ENST00000295324 ADRA2AP08913 450 aa15.47■□□□□ 0.07
CDC42EP3-201ENST00000295324 IL11P20809 199 aa15.47■□□□□ 0.07
CDC42EP3-201ENST00000295324 TOR2AQ5JU69 321 aa15.47■□□□□ 0.07
CDC42EP3-201ENST00000295324 GLCCI1Q86VQ1 547 aa15.47■□□□□ 0.07
CDC42EP3-201ENST00000295324 DOLPP1Q86YN1 238 aa15.47■□□□□ 0.07
CDC42EP3-201ENST00000295324 ADAMTS17Q8TE56 1095 aa15.47■□□□□ 0.07
CDC42EP3-201ENST00000295324 C20orf24Q9BUV8 137 aa15.47■□□□□ 0.07
CDC42EP3-201ENST00000295324 KPTNQ9Y664 436 aa15.47■□□□□ 0.07
CDC42EP3-201ENST00000295324 A0A0U1RQV5 110 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 TNXAQ16473 311 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 ZBTB44Q8NCP5 570 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 BPIFCQ8NFQ6 507 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 OR52B4Q8NGK2 314 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 GPA33Q99795 319 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 NKX6-2Q9C056 277 aaPredicted RBP15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 MS4A7Q9GZW8 240 aaPredicted RBP15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 ZNF331Q9NQX6 463 aaPredicted RBP15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 SLC25A10Q9UBX3 287 aaPredicted RBP15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 CST7O76096 145 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 SFT2D2O95562 160 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 PGA4P0DJD7 388 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 PMELP40967 661 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 RPL31P62899 125 aaKnown RBP15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 ZNF787Q6DD87 383 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 OR4F5Q8NH21 305 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 OR4F4Q96R69 305 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 GSX2Q9BZM3 304 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 AAMDCQ9H7C9 122 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 RFPL4AA6NLU0 287 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 RFPL4AL1F8VTS6 287 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 GLDNQ6ZMI3 551 aaPredicted RBP15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 SHISA5Q8N114 240 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 OR10Z1Q8NGY1 313 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 GPX7Q96SL4 187 aaPredicted RBP15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 H3F3CQ6NXT2 135 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 CADM3Q8N126 398 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 OR1K1Q8NGR3 316 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 RAB18Q9NP72 206 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 WIPI2Q9Y4P8 454 aa15.46■□□□□ 0.07
CDC42EP3-201ENST00000295324 ZNF236Q9UL36 1845 aa15.46■□□□□ 0.06
CDC42EP3-201ENST00000295324 A0A1W2PNV4 684 aa15.46■□□□□ 0.06
CDC42EP3-201ENST00000295324 SEC14L6B5MCN3 397 aa15.46■□□□□ 0.06
CDC42EP3-201ENST00000295324 LRFN3Q9BTN0 628 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms