RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 YRDCQ86U90 279 aaKnown RBP11.42□□□□□ -0.58
SLC28A1-201ENST00000286749 TBC1D26Q86UD7 250 aa11.42□□□□□ -0.58
SLC28A1-201ENST00000286749 TDHQ8IZJ6 230 aa11.42□□□□□ -0.58
SLC28A1-201ENST00000286749 TMEM171Q8WVE6 324 aa11.42□□□□□ -0.58
SLC28A1-201ENST00000286749 TCTEX1D2Q8WW35 142 aa11.42□□□□□ -0.58
SLC28A1-201ENST00000286749 WNT5BQ9H1J7 359 aa11.42□□□□□ -0.58
SLC28A1-201ENST00000286749 WDR54Q9H977 334 aa11.42□□□□□ -0.58
SLC28A1-201ENST00000286749 SLC7A10Q9NS82 523 aa11.42□□□□□ -0.58
SLC28A1-201ENST00000286749 MIOXQ9UGB7 285 aa11.42□□□□□ -0.58
SLC28A1-201ENST00000286749 SLC33A1O00400 549 aaPredicted RBP11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 PITX3O75364 302 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 SRPXP78539 464 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 NCMAPQ5T1S8 102 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 SPSB3Q6PJ21 355 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 SLC25A26Q70HW3 274 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 DPPA2Q7Z7J5 298 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 ZNF695Q8IW36 515 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 ZNF611Q8N823 705 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 YPEL4Q96NS1 127 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 SF3B5Q9BWJ5 86 aaKnown RBP11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 OR2H1Q9GZK4 316 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 ZNF700Q9H0M5 742 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 TRAV20A0A0B4J274 112 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 CCDC163A0A0D9SF12 145 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 EIF2S3P41091 472 aaKnown RBP11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 RAC3P60763 192 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 HAGHQ16775 308 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 KRTAP27-1Q3LI81 207 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 CXorf66Q5JRM2 361 aaPredicted RBP11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 AAED1Q7RTV5 226 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 ZNF100Q8IYN0 542 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 CPT1CQ8TCG5 803 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 DUSP23Q9BVJ7 150 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 SH2D2AQ9NP31 389 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 GLRX2Q9NS18 164 aa11.41□□□□□ -0.58
SLC28A1-201ENST00000286749 A0A0G2JMM0 328 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 ZNF816-ZNF321PA0A0X1KG74 233 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 A0A1W2PPB8 328 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 A0A1W2PRS3 328 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 GJE1A6NN92 205 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 KIR3DP1A8MWS1 328 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 ZNF587BE7ETH6 402 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 ADAM20O43506 726 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 CBR3O75828 277 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 NXPH3O95157 252 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 IFNA17P01571 189 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 EXT1Q16394 746 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 CEACAM16Q2WEN9 425 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 HIKESHIQ53FT3 197 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 FAM209BQ5JX69 171 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 HEPN1Q6WQI6 88 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 SPEM1Q8N4L4 309 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 TMEM252Q8N6L7 170 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 OR5C1Q8NGR4 320 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 EXTL1Q92935 676 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 MR1Q95460 341 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 FOXB1Q99853 325 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 PAPOLGQ9BWT3 736 aaKnown RBP11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 OR51M1Q9H341 326 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 PLEKHF2Q9H8W4 249 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 LYRM2Q9NU23 88 aaPredicted RBP11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 COLQQ9Y215 455 aaPredicted RBP11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 MMP24Q9Y5R2 645 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 HS3ST3B1Q9Y662 390 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 ZNF716A6NP11 495 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 ZNF727A8MUV8 499 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 PROB1E7EW31 1015 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 H3BQ15 152 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 CST7O76096 145 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 EDN3P14138 238 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 MAS1LP35410 378 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 CARD18P57730 90 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 B3GALT5-AS1P59052 145 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 RND3P61587 244 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 VAMP2P63027 116 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 ACER2Q5QJU3 275 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 RPS19BP1Q86WX3 136 aaKnown RBP11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 SELENOHQ8IZQ5 122 aaKnown RBP11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 FAM185AQ8N0U4 392 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 TMEM56Q96MV1 263 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 PARPBPQ9NWS1 579 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 ZNF391Q9UJN7 358 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 LIPGQ9Y5X9 500 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 TMEM56-RWDD3S4R434 201 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 COL6A3P12111 3177 aa11.4□□□□□ -0.58
SLC28A1-201ENST00000286749 PPIHO43447 177 aaKnown RBP11.39□□□□□ -0.59
SLC28A1-201ENST00000286749 CXCL13O43927 109 aa11.39□□□□□ -0.59
SLC28A1-201ENST00000286749 CYC1P08574 325 aa11.39□□□□□ -0.59
SLC28A1-201ENST00000286749 RPS10P46783 165 aaKnown RBP11.39□□□□□ -0.59
SLC28A1-201ENST00000286749 DYNLT3P51808 116 aa11.39□□□□□ -0.59
SLC28A1-201ENST00000286749 STARD6P59095 220 aa11.39□□□□□ -0.59
SLC28A1-201ENST00000286749 ZNF818PQ6ZRF7 136 aa11.39□□□□□ -0.59
SLC28A1-201ENST00000286749 TMEM217Q8N7C4 229 aa11.39□□□□□ -0.59
SLC28A1-201ENST00000286749 RAB39BQ96DA2 213 aa11.39□□□□□ -0.59
SLC28A1-201ENST00000286749 MUCL1Q96DR8 90 aa11.39□□□□□ -0.59
SLC28A1-201ENST00000286749 SPIN2AQ99865 258 aa11.39□□□□□ -0.59
SLC28A1-201ENST00000286749 SPIN2BQ9BPZ2 258 aa11.39□□□□□ -0.59
SLC28A1-201ENST00000286749 SMDT1Q9H4I9 107 aa11.39□□□□□ -0.59
SLC28A1-201ENST00000286749 PLSCR2Q9NRY7 297 aa11.39□□□□□ -0.59
SLC28A1-201ENST00000286749 WNT16Q9UBV4 365 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms