RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 DIABLOQ9NR28 239 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 KAAG1Q9UBP8 84 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 GLS2Q9UI32 602 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 DOCK11Q5JSL3 2073 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 TRAV18A0A075B6X5 111 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 NDUFS8O00217 210 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 SIGLEC5O15389 551 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 ZNF260Q3ZCT1 412 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 MUC20Q8N307 709 aaPredicted RBP18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 CHST4Q8NCG5 386 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 OR4S1Q8NGB4 309 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 DPCDQ9BVM2 203 aaPredicted RBP18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 DNTTIP1Q9H147 329 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 PLEKHJ1Q9NW61 149 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 HSF4Q9ULV5 492 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 A0A0A6YYH2 397 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 A6NJ64 397 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 MFNGO00587 321 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 ADAM20O43506 726 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 NDUFA2O43678 99 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 CSF3P09919 207 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 NR4A2P43354 598 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 OR3A1P47881 315 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 CDNFQ49AH0 187 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 TMEM69Q5SWH9 247 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 ZNF561Q8N587 486 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 ASCC1Q8N9N2 400 aaKnown RBP18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 DYRK2Q92630 601 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 NEDD4LQ96PU5 975 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 ABHD1Q96SE0 405 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 NUDT16L1Q9BRJ7 211 aaKnown RBP18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 PIMREGQ9BSJ6 248 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 PPA2Q9H2U2 334 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 V9GYH0 126 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 MALRD1Q5VYJ5 2156 aa18.14■□□□□ 0.49
PDLIM3-203ENST00000284771 K7N7A8 449 aa18.13■□□□□ 0.49
PDLIM3-203ENST00000284771 WNT2P09544 360 aa18.13■□□□□ 0.49
PDLIM3-203ENST00000284771 HIST1H1DP16402 221 aaKnown RBP18.13■□□□□ 0.49
PDLIM3-203ENST00000284771 TAS2R20P59543 309 aa18.13■□□□□ 0.49
PDLIM3-203ENST00000284771 IL13RA1P78552 427 aa18.13■□□□□ 0.49
PDLIM3-203ENST00000284771 KCNJ8Q15842 424 aa18.13■□□□□ 0.49
PDLIM3-203ENST00000284771 Q5PR19 223 aa18.13■□□□□ 0.49
PDLIM3-203ENST00000284771 ZNF841Q6ZN19 808 aa18.13■□□□□ 0.49
PDLIM3-203ENST00000284771 ST8SIA4Q92187 359 aa18.13■□□□□ 0.49
PDLIM3-203ENST00000284771 PHF21AQ96BD5 680 aa18.13■□□□□ 0.49
PDLIM3-203ENST00000284771 ADAM30Q9UKF2 790 aa18.13■□□□□ 0.49
PDLIM3-203ENST00000284771 MRPS7Q9Y2R9 242 aaKnown RBP18.13■□□□□ 0.49
PDLIM3-203ENST00000284771 A0A0G2JMP0 313 aa18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 A0A0X1KG70 313 aa18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 UBE2QL1A1L167 161 aa18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 TK1P04183 234 aa18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 ETV6P41212 452 aa18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 DSCR9P59020 149 aa18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 SEC61A1P61619 476 aaKnown RBP18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 PAN3Q58A45 887 aaKnown RBP18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 LINC00299Q6ZSB3 139 aa18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 OR4M2Q8NGB6 313 aa18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 GCDHQ92947 438 aaPredicted RBP18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 SNX22Q96L94 193 aa18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 SPACA1Q9HBV2 294 aa18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 ZNF469Q96JG9 3925 aaPredicted RBP18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 TMEM235A6NFC5 223 aa18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 SCGNO76038 276 aa18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 SLC36A1Q7Z2H8 476 aa18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 PLPPR1Q8TBJ4 325 aa18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 AUNIPQ9H7T9 357 aa18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 PATZ1Q9HBE1 687 aaKnown RBP18.12■□□□□ 0.49
PDLIM3-203ENST00000284771 ARHGAP32A7KAX9 2087 aa18.11■□□□□ 0.49
PDLIM3-203ENST00000284771 IGHV4-61A0A0C4DH41 118 aa18.11■□□□□ 0.49
PDLIM3-203ENST00000284771 FABP12A6NFH5 140 aa18.11■□□□□ 0.49
PDLIM3-203ENST00000284771 TALDO1P37837 337 aa18.11■□□□□ 0.49
PDLIM3-203ENST00000284771 LMO4P61968 165 aa18.11■□□□□ 0.49
PDLIM3-203ENST00000284771 ATXN7L3Q14CW9 347 aaPredicted RBP18.11■□□□□ 0.49
PDLIM3-203ENST00000284771 KIAA2026Q5HYC2 2103 aa18.11■□□□□ 0.49
PDLIM3-203ENST00000284771 PRSS57Q6UWY2 283 aa18.11■□□□□ 0.49
PDLIM3-203ENST00000284771 OR8H2Q8N162 312 aa18.11■□□□□ 0.49
PDLIM3-203ENST00000284771 SPICQ8N5J4 248 aa18.11■□□□□ 0.49
PDLIM3-203ENST00000284771 CLDND2Q8NHS1 167 aa18.11■□□□□ 0.49
PDLIM3-203ENST00000284771 MED30Q96HR3 178 aa18.11■□□□□ 0.49
PDLIM3-203ENST00000284771 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.11■□□□□ 0.49
PDLIM3-203ENST00000284771 AK3Q9UIJ7 227 aa18.11■□□□□ 0.49
PDLIM3-203ENST00000284771 MCRIP1C9JLW8 97 aa18.1■□□□□ 0.49
PDLIM3-203ENST00000284771 DVL1O14640 695 aa18.1■□□□□ 0.49
PDLIM3-203ENST00000284771 MELTFP08582 738 aa18.1■□□□□ 0.49
PDLIM3-203ENST00000284771 AESQ08117 197 aa18.1■□□□□ 0.49
PDLIM3-203ENST00000284771 GRK1Q15835 563 aa18.1■□□□□ 0.49
PDLIM3-203ENST00000284771 ZNF79Q15937 498 aa18.1■□□□□ 0.49
PDLIM3-203ENST00000284771 Q6ZPA2 131 aa18.1■□□□□ 0.49
PDLIM3-203ENST00000284771 MFSD4AQ8N468 514 aa18.1■□□□□ 0.49
PDLIM3-203ENST00000284771 TPRX1Q8N7U7 411 aa18.1■□□□□ 0.49
PDLIM3-203ENST00000284771 TMEM185AQ8NFB2 350 aa18.1■□□□□ 0.49
PDLIM3-203ENST00000284771 COQ2Q96H96 371 aa18.1■□□□□ 0.49
PDLIM3-203ENST00000284771 HDHD3Q9BSH5 251 aaPredicted RBP18.1■□□□□ 0.49
PDLIM3-203ENST00000284771 AKIP1Q9NQ31 210 aa18.1■□□□□ 0.49
PDLIM3-203ENST00000284771 ING3Q9NXR8 418 aa18.1■□□□□ 0.49
PDLIM3-203ENST00000284771 MIOXQ9UGB7 285 aa18.1■□□□□ 0.49
PDLIM3-203ENST00000284771 A0A096LNT2 108 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 MEIOCA2RUB1 952 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 NKX6-3A6NJ46 265 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 F5H0A9 414 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms