RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 TRAV17A0A0B4J275 112 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 A0A0D9SG52 128 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 LINC00862A6NCI5 91 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 ZNF724A8MTY0 619 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 NXPH2O95156 264 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 TK1P04183 234 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 GNRHRP30968 328 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 ALDH3B1P43353 468 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 PPP1CBP62140 327 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 RBM39Q14498 530 aaKnown RBP5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 SMCO1Q147U7 214 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 IZUMO4Q1ZYL8 232 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 CEACAM21Q3KPI0 293 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 TMEM42Q69YG0 159 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 LHFPL1Q86WI0 220 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 SUN5Q8TC36 379 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 RNF126Q9BV68 326 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 HRH4Q9H3N8 390 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 ZNF71Q9NQZ8 489 aaPredicted RBP5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 C1orf123Q9NWV4 160 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 KCNS2Q9ULS6 477 aa5.18□□□□□ -1.58
TNFSF4-201ENST00000281834 OR6C65A6NJZ3 312 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 FOXI3A8MTJ6 420 aaPredicted RBP5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 B8ZZF3 427 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 K7EM74 188 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 WNT9BO14905 357 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 BCL2L11O43521 198 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 CNOT4O95628 575 aaKnown RBP5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 PPYP01298 95 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 CD8AP01732 235 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 IGHV3-13P01766 116 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 IGHV3-7P01780 117 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 NAT1P18440 290 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 BTN1A1Q13410 526 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 SNTB1Q13884 538 aaKnown RBP5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 PAN3Q58A45 887 aaKnown RBP5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 TMEM268Q5VZI3 342 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 TFAP2EQ6VUC0 442 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 FBXW12Q6X9E4 464 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 FAM214BQ7L5A3 538 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 PIP4P1Q86T03 277 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 KCNRGQ8N5I3 272 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 OR6K3Q8NGY3 331 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 BCL2L2Q92843 193 aaPredicted RBP5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 TAAR6Q96RI8 345 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 ARPC5LQ9BPX5 153 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 ADAT1Q9BUB4 502 aaKnown RBP5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 LINC00470Q9BZP3 86 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 PCDHB16Q9NRJ7 776 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 ZNF175Q9Y473 711 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 DOCK11Q5JSL3 2073 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 PQLC2LA1A4F0 135 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 DEGS1O15121 323 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 TIMM8AO60220 97 aaPredicted RBP5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 OR2F2O95006 317 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 MPV17P39210 176 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 CAV2P51636 162 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 GNG3P63215 75 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 CYCSP99999 105 aaKnown RBP5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 DHODHQ02127 395 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 MRPL49Q13405 166 aaKnown RBP5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 OR2F1Q13607 317 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 TUSC1Q2TAM9 212 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 OR2B11Q5JQS5 317 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 RPL7L1Q6DKI1 246 aaKnown RBP5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 FAHD2BQ6P2I3 314 aaPredicted RBP5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 C20orf204Q6ZNR8 217 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 FAM58AQ8N1B3 248 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 STPG2Q8N412 459 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 ZNF610Q8N9Z0 462 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 SUMF2Q8NBJ7 301 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 PXT1Q8NFP0 134 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 FAHD2AQ96GK7 314 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 KIRREL1Q96J84 757 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 C2orf50Q96LR7 162 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 SLC5A7Q9GZV3 580 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 RNF122Q9H9V4 155 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 TREM2Q9NZC2 230 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 ZNF391Q9UJN7 358 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 RNF150Q9ULK6 438 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 IGKV1D-13A0A0B4J2D9 117 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 ZNF705EA8MWA4 302 aaPredicted RBP5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 CDRT15L2A8MXV6 281 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 H3BP45 60 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 K7EPK0 472 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 WDR1O75083 606 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 IGKV1-13P0DP09 117 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 RPS2P15880 293 aaKnown RBP5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 ZNF83P51522 516 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 TCF15Q12870 199 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 CLINT1Q14677 625 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 PPA1Q15181 289 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 PRAMEF6Q5VXH4 476 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 FAM53AQ6NSI3 398 aaPredicted RBP5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 COLCA1Q6ZS62 124 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 GAPTQ8N292 157 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 FAM71E2Q8N5Q1 922 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 TMEM217Q8N7C4 229 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 OR52M1Q8NGK5 317 aa5.17□□□□□ -1.58
TNFSF4-201ENST00000281834 OR1S2Q8NGQ3 325 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms