RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 WDFY1Q8IWB7 410 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 PRR22Q8IZ63 422 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 ZADH2Q8N4Q0 377 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 Q8NA96 180 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 OR5L2Q8NGL0 311 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 OR1N1Q8NGS0 311 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 OR2AJ1Q8NGZ0 328 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 DDIT4LQ96D03 193 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 MARS2Q96GW9 593 aaKnown RBP8.95□□□□□ -0.98
UPF3B-201ENST00000276201 ST6GALNAC5Q9BVH7 336 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 PRDM13Q9H4Q3 707 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 GPR84Q9NQS5 396 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 LSM5Q9Y4Y9 91 aaKnown RBP8.95□□□□□ -0.98
UPF3B-201ENST00000276201 V9GYS6 101 aa8.95□□□□□ -0.98
UPF3B-201ENST00000276201 IGKV1-9A0A0C4DH69 117 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 SDCBPO00560 298 aaPredicted RBP8.94□□□□□ -0.98
UPF3B-201ENST00000276201 PRKNO60260 465 aaPredicted RBP8.94□□□□□ -0.98
UPF3B-201ENST00000276201 HSPB1P04792 205 aaKnown RBP8.94□□□□□ -0.98
UPF3B-201ENST00000276201 DAOP14920 347 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 BLVRBP30043 206 aaPredicted RBP8.94□□□□□ -0.98
UPF3B-201ENST00000276201 OR2B8PP59922 312 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 ZNF506Q5JVG8 444 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 LIAT1Q6ZQX7 453 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.94□□□□□ -0.98
UPF3B-201ENST00000276201 SLC35E3Q7Z769 313 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 APCDD1LQ8NCL9 501 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 NOXO1Q8NFA2 376 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 PP6455Q8WZ26 134 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 TMEM242Q9NWH2 141 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 GFOD1Q9NXC2 390 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 DOK5Q9P104 306 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 TRBV23-1A0A0A0MS06 115 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 RBFOX3A6NFN3 312 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 ZNF724A8MTY0 619 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 ST8SIA5O15466 376 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 PITX3O75364 302 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 SRP19P09132 144 aaKnown RBP8.94□□□□□ -0.98
UPF3B-201ENST00000276201 MMP9P14780 707 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 IL11P20809 199 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 CEACAM6P40199 344 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 POU3F1Q03052 451 aaPredicted RBP8.94□□□□□ -0.98
UPF3B-201ENST00000276201 ZNF266Q14584 549 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 HIST3H3Q16695 136 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 NCMAPQ5T1S8 102 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 HIST2H3PS2Q5TEC6 136 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 ABHD12BQ7Z5M8 362 aaPredicted RBP8.94□□□□□ -0.98
UPF3B-201ENST00000276201 POM121Q96HA1 1249 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 RCC1LQ96I51 464 aaKnown RBP8.94□□□□□ -0.98
UPF3B-201ENST00000276201 ZNF2Q9BSG1 426 aaPredicted RBP8.94□□□□□ -0.98
UPF3B-201ENST00000276201 PLA2G3Q9NZ20 509 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 ANXA10Q9UJ72 324 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 ZDHHC8Q9ULC8 765 aa8.94□□□□□ -0.98
UPF3B-201ENST00000276201 TRBV11-1A0A0K0K1C0 115 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 LOC102725191A0A1B0GVB3 256 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 ZNF732B4DXR9 585 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 HSD17B6O14756 317 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 ST8SIA3O43173 380 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 KNG1P01042 644 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 PGA4P0DJD7 388 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 PGA3P0DJD8 388 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 PLA2G2AP14555 144 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 PKIAP61925 76 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 SRPXP78539 464 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 C17orf67Q0P5P2 114 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 ELOBQ15370 118 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 KISS1Q15726 138 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 ABHD17BQ5VST6 288 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 SPSB3Q6PJ21 355 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 Q6ZS92 163 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 LGI3Q8N145 548 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 ZNF383Q8NA42 475 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 OR4D5Q8NGN0 318 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 OR5R1Q8NH85 324 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 CD300LFQ8TDQ1 290 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 BSCL2Q96G97 398 aaPredicted RBP8.93□□□□□ -0.98
UPF3B-201ENST00000276201 Q96M66 194 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 GAL3ST4Q96RP7 486 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 GPER1Q99527 375 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 SMIM3Q9BZL3 60 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 SERINC1Q9NRX5 453 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 NECAP2Q9NVZ3 263 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 B3GAT1Q9P2W7 334 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 COPS7AQ9UBW8 275 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 FASNP49327 2511 aaKnown RBP8.93□□□□□ -0.98
UPF3B-201ENST00000276201 IGLV3-32A0A0A0MS00 114 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 TRAV1-1A0A0B4J248 108 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 A0A1W2PP11 408 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 DHRS7CA6NNS2 312 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 NDUFS6O75380 124 aaKnown RBP8.93□□□□□ -0.98
UPF3B-201ENST00000276201 CDS2O95674 445 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 PTBP3O95758 552 aaKnown RBP8.93□□□□□ -0.98
UPF3B-201ENST00000276201 IGHG1P01857 330 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 PRH1P02810 166 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 MSX1P28360 303 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 RPS10P46783 165 aaKnown RBP8.93□□□□□ -0.98
UPF3B-201ENST00000276201 GLIPR1P48060 266 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 RND2P52198 227 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 BIDP55957 195 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 HIST3H2BBQ8N257 126 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 OR6X1Q8NH79 312 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms