RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 MFSD2BA6NFX1 497 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 FIGNL2A6NMB9 653 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 OR8G1Q15617 311 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 ZIC4Q8N9L1 334 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 TMEM178AQ8NBL3 297 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 SLC30A7Q8NEW0 376 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 TREM2Q9NZC2 230 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 GNG12Q9UBI6 72 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 LY6G6EA0A0G2JKS1 128 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 E5RGE8 158 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 G3V3Q6 166 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 H0YIZ8 118 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 ABCD4O14678 606 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 NKX2-8O15522 239 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 KRASP01116 189 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 PPYP01298 95 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 PRF1P14222 555 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 FAM3AP98173 230 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 CLEC12BQ2HXU8 276 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 PBDC1Q9BVG4 233 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 SF3B5Q9BWJ5 86 aaKnown RBP10.87□□□□□ -0.67
UBXN4-201ENST00000272638 TINAGQ9UJW2 476 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 NSG2Q9Y328 171 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 U3KQA8 63 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 CACNA1BQ00975 2339 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 WDFY4Q6ZS81 3184 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 TMEM267Q0VDI3 215 aaPredicted RBP10.87□□□□□ -0.67
UBXN4-201ENST00000272638 TESK1Q15569 626 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 CLPPQ16740 277 aaPredicted RBP10.87□□□□□ -0.67
UBXN4-201ENST00000272638 NUFIP2Q7Z417 695 aaKnown RBP10.87□□□□□ -0.67
UBXN4-201ENST00000272638 OR10V1Q8NGI7 309 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 EDARQ9UNE0 448 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 TECTAO75443 2155 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 RNASEK-C17orf49H0YIS7 233 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 TXNL1O43396 289 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 SFTA3P0C7M3 94 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 ZNF816Q0VGE8 651 aaPredicted RBP10.86□□□□□ -0.67
UBXN4-201ENST00000272638 SOHLH1Q5JUK2 328 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 VAX1Q5SQQ9 334 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 OVCH2Q7RTZ1 564 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 TBC1D26Q86UD7 250 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 THNSL2Q86YJ6 484 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 MRPS24Q96EL2 167 aaKnown RBP10.86□□□□□ -0.67
UBXN4-201ENST00000272638 CLCC1Q96S66 551 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 SLC26A1Q9H2B4 701 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 PURGQ9UJV8 347 aaKnown RBP10.86□□□□□ -0.67
UBXN4-201ENST00000272638 KCNMB2Q9Y691 235 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 FRYLO94915 3013 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 KIR2DS1A0A191URI9 304 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 C3orf85A0A1B0GTC6 90 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 TMEM218A2RU14 115 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 M0R296 226 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 KIR2DS4P43632 304 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 RPS10P46783 165 aaKnown RBP10.86□□□□□ -0.67
UBXN4-201ENST00000272638 RPL23AP62750 156 aaKnown RBP10.86□□□□□ -0.67
UBXN4-201ENST00000272638 KIR2DS1Q14954 304 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 SLC35G3Q8N808 338 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 PLK3Q9H4B4 646 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 FN3KRPQ9HA64 309 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 WIPF3A6NGB9 483 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 CD37P11049 281 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 CEBPDP49716 269 aaPredicted RBP10.86□□□□□ -0.67
UBXN4-201ENST00000272638 Q0VFX4 171 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 ZNF385CQ66K41 422 aaPredicted RBP10.86□□□□□ -0.67
UBXN4-201ENST00000272638 HSD17B13Q7Z5P4 300 aaPredicted RBP10.86□□□□□ -0.67
UBXN4-201ENST00000272638 CPEB3Q8NE35 698 aaKnown RBP10.86□□□□□ -0.67
UBXN4-201ENST00000272638 AIFM2Q9BRQ8 373 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 OR2J1Q9GZK6 312 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 MSL2Q9HCI7 577 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 LHX6Q9UPM6 363 aa10.86□□□□□ -0.67
UBXN4-201ENST00000272638 WNK2Q9Y3S1 2297 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.85□□□□□ -0.67
UBXN4-201ENST00000272638 CEBPZOSA8MTT3 80 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 SHOXO15266 292 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 TPPPO94811 219 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 CTSDP07339 412 aaPredicted RBP10.85□□□□□ -0.67
UBXN4-201ENST00000272638 FAM58AQ8N1B3 248 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 OR52M1Q8NGK5 317 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 OR5C1Q8NGR4 320 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 TMEM230Q96A57 120 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 RTBDNQ9BSG5 229 aaPredicted RBP10.85□□□□□ -0.67
UBXN4-201ENST00000272638 TUBAL3A6NHL2 446 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 NPIPB13A6NJU9 1138 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 C1orf196B1AJZ1 125 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 NPIPB4C9JG80 1138 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 PJVKQ0ZLH3 352 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 FAHD2BQ6P2I3 314 aaPredicted RBP10.85□□□□□ -0.67
UBXN4-201ENST00000272638 ZNF573Q86YE8 665 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 RXFP4Q8TDU9 374 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 FAHD2AQ96GK7 314 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 Q96M66 194 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 NMES1Q9C002 83 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 ZNF552Q9H707 407 aaPredicted RBP10.85□□□□□ -0.67
UBXN4-201ENST00000272638 CEP295Q9C0D2 2601 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 PLCE1Q9P212 2302 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 LDLRAD4O15165 306 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 IFNA17P01571 189 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 GLAP06280 429 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 BMP5P22003 454 aa10.85□□□□□ -0.67
UBXN4-201ENST00000272638 PTAFRP25105 342 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms