RNA–Protein interactions for RNA: ENST00000272133.3

CNIH3-201, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNIH3, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-201ENST00000272133 FOXL2NBQ6ZUU3 175 aa16.16■□□□□ 0.18
CNIH3-201ENST00000272133 P4HA3Q7Z4N8 544 aa16.16■□□□□ 0.18
CNIH3-201ENST00000272133 TMEM123Q8N131 208 aa16.16■□□□□ 0.18
CNIH3-201ENST00000272133 SNIP1Q8TAD8 396 aaKnown RBP16.16■□□□□ 0.18
CNIH3-201ENST00000272133 SPACA9Q96E40 222 aaPredicted RBP16.16■□□□□ 0.18
CNIH3-201ENST00000272133 GPR61Q9BZJ8 451 aa16.16■□□□□ 0.18
CNIH3-201ENST00000272133 PRDM13Q9H4Q3 707 aa16.16■□□□□ 0.18
CNIH3-201ENST00000272133 TRDCB7Z8K6 153 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 NPIPA2E9PIF3 369 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 NPIPA3F8WFD2 350 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 CDS2O95674 445 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 DYNLT3P51808 116 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 NXPH1P58417 271 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 CNN3Q15417 329 aaKnown RBP16.15■□□□□ 0.18
CNIH3-201ENST00000272133 SYT13Q7L8C5 426 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 ODF3L1Q8IXM7 274 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 FADS6Q8N9I5 356 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 TMEM222Q9H0R3 208 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 OPA3Q9H6K4 179 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 PLEKHF2Q9H8W4 249 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 LYRM2Q9NU23 88 aaPredicted RBP16.15■□□□□ 0.18
CNIH3-201ENST00000272133 OR8G5Q8NG78 346 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 INTS12Q96CB8 462 aaKnown RBP16.15■□□□□ 0.18
CNIH3-201ENST00000272133 TVP23CQ96ET8 276 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 NIPSNAP3BQ9BS92 247 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 ULBP2Q9BZM5 246 aa16.15■□□□□ 0.18
CNIH3-201ENST00000272133 BTBD17A6NE02 478 aa16.14■□□□□ 0.17
CNIH3-201ENST00000272133 TMEM50AO95807 157 aa16.14■□□□□ 0.17
CNIH3-201ENST00000272133 GLB1P16278 677 aa16.14■□□□□ 0.17
CNIH3-201ENST00000272133 CRYGSP22914 178 aa16.14■□□□□ 0.17
CNIH3-201ENST00000272133 GNRHRP30968 328 aa16.14■□□□□ 0.17
CNIH3-201ENST00000272133 ZNF774Q6NX45 483 aa16.14■□□□□ 0.17
CNIH3-201ENST00000272133 BCO1Q9HAY6 547 aa16.14■□□□□ 0.17
CNIH3-201ENST00000272133 HSPA12AO43301 675 aa16.14■□□□□ 0.17
CNIH3-201ENST00000272133 ADAM20O43506 726 aa16.14■□□□□ 0.17
CNIH3-201ENST00000272133 SP5Q6BEB4 398 aaPredicted RBP16.14■□□□□ 0.17
CNIH3-201ENST00000272133 TBC1D26Q86UD7 250 aa16.14■□□□□ 0.17
CNIH3-201ENST00000272133 ZNF695Q8IW36 515 aa16.14■□□□□ 0.17
CNIH3-201ENST00000272133 ZNF100Q8IYN0 542 aa16.14■□□□□ 0.17
CNIH3-201ENST00000272133 ZNF442Q9H7R0 627 aa16.14■□□□□ 0.17
CNIH3-201ENST00000272133 P4HTMQ9NXG6 502 aa16.14■□□□□ 0.17
CNIH3-201ENST00000272133 UBE2J1Q9Y385 318 aaPredicted RBP16.14■□□□□ 0.17
CNIH3-201ENST00000272133 CHCHD2Q9Y6H1 151 aaPredicted RBP16.14■□□□□ 0.17
CNIH3-201ENST00000272133 SEC14L6B5MCN3 397 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 LCATP04180 440 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 HSPB1P04792 205 aaKnown RBP16.13■□□□□ 0.17
CNIH3-201ENST00000272133 ZNF506Q5JVG8 444 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 CLDND2Q8NHS1 167 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 OR6C1Q96RD1 312 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 SDK2Q58EX2 2172 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 PPP1R2P9O14990 202 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 NRASP01111 189 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 PATE4P0C8F1 98 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 VAMP2P63027 116 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 KHDC3LQ587J8 217 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 SPIN3Q5JUX0 258 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 ASCL4Q6XD76 172 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 LHFPL2Q6ZUX7 228 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 KMT5CQ86Y97 462 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 HIST3H2BBQ8N257 126 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 CCDC54Q8NEL0 328 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 NAT6Q93015 286 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 SLC7A10Q9NS82 523 aa16.13■□□□□ 0.17
CNIH3-201ENST00000272133 FOXD3Q9UJU5 478 aaPredicted RBP16.13■□□□□ 0.17
CNIH3-201ENST00000272133 ZNF587BE7ETH6 402 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 PDCD6O75340 191 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 TCN2P20062 427 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 GLIPR1P48060 266 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 RPL23AP62750 156 aaKnown RBP16.12■□□□□ 0.17
CNIH3-201ENST00000272133 NKX6-1P78426 367 aaPredicted RBP16.12■□□□□ 0.17
CNIH3-201ENST00000272133 MALLQ13021 153 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 RABEPKQ7Z6M1 372 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 MAML2Q8IZL2 1156 aaPredicted RBP16.12■□□□□ 0.17
CNIH3-201ENST00000272133 SLC25A45Q8N413 288 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 SLC25A31Q9H0C2 315 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 ZNF732B4DXR9 585 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 SYNGR3O43761 229 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 OR7C1O76099 320 aaPredicted RBP16.12■□□□□ 0.17
CNIH3-201ENST00000272133 DKK1O94907 266 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 F10P00742 488 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 HIST1H1BP16401 226 aaKnown RBP16.12■□□□□ 0.17
CNIH3-201ENST00000272133 ZNF154Q13106 437 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 DAZAP2Q15038 168 aaPredicted RBP16.12■□□□□ 0.17
CNIH3-201ENST00000272133 AKR1C8PQ5T2L2 129 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 RAET1LQ5VY80 246 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 SELENOHQ8IZQ5 122 aaKnown RBP16.12■□□□□ 0.17
CNIH3-201ENST00000272133 DEFB126Q9BYW3 111 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 GFOD1Q9NXC2 390 aa16.12■□□□□ 0.17
CNIH3-201ENST00000272133 SCRG1O75711 98 aa16.11■□□□□ 0.17
CNIH3-201ENST00000272133 FAM27BQ5VT28 67 aa16.11■□□□□ 0.17
CNIH3-201ENST00000272133 S100PBPQ96BU1 408 aa16.11■□□□□ 0.17
CNIH3-201ENST00000272133 CALHM2Q9HA72 323 aa16.11■□□□□ 0.17
CNIH3-201ENST00000272133 SIRT7Q9NRC8 400 aa16.11■□□□□ 0.17
CNIH3-201ENST00000272133 CXorf65A6NEN9 183 aa16.11■□□□□ 0.17
CNIH3-201ENST00000272133 SRPXP78539 464 aa16.11■□□□□ 0.17
CNIH3-201ENST00000272133 OR2T2Q6IF00 324 aa16.11■□□□□ 0.17
CNIH3-201ENST00000272133 WDR74Q6RFH5 385 aaPredicted RBP16.11■□□□□ 0.17
CNIH3-201ENST00000272133 ZNF818PQ6ZRF7 136 aa16.11■□□□□ 0.17
CNIH3-201ENST00000272133 DPPA2Q7Z7J5 298 aa16.11■□□□□ 0.17
CNIH3-201ENST00000272133 CMTM1Q8IZ96 169 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms