RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 RPEQ96AT9 228 aa11.32□□□□□ -0.6
COMMD4-201ENST00000267935 MYCBPQ99417 103 aaPredicted RBP11.32□□□□□ -0.6
COMMD4-201ENST00000267935 GNG8Q9UK08 70 aa11.32□□□□□ -0.6
COMMD4-201ENST00000267935 MOB4Q9Y3A3 225 aa11.32□□□□□ -0.6
COMMD4-201ENST00000267935 AMMECR1Q9Y4X0 333 aaPredicted RBP11.32□□□□□ -0.6
COMMD4-201ENST00000267935 HSPE1-MOB4S4R3N1 261 aa11.32□□□□□ -0.6
COMMD4-201ENST00000267935 ODAMA1E959 279 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 ZNF729A6NN14 1252 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-201ENST00000267935 NUDT19A8MXV4 375 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 DEGS1O15121 323 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 RPSAP08865 295 aaKnown RBP11.31□□□□□ -0.6
COMMD4-201ENST00000267935 CALCBP10092 127 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 HOXD3P31249 432 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-201ENST00000267935 MYCNOSP40205 109 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 OR3A4PP47883 348 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 GLIPR1P48060 266 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 AESQ08117 197 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 ZSCAN26Q16670 478 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 SSX6Q7RTT6 188 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 MRPL41Q8IXM3 137 aaKnown RBP11.31□□□□□ -0.6
COMMD4-201ENST00000267935 RDH10Q8IZV5 341 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 LINC00482Q8N8I6 264 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 OR9G1Q8NH87 305 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 UTP4Q969X6 686 aaKnown RBP11.31□□□□□ -0.6
COMMD4-201ENST00000267935 FGGYQ96C11 551 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 HRASLS5Q96KN8 279 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 OPALINQ96PE5 141 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 B9D2Q9BPU9 175 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 IL36RNQ9UBH0 155 aa11.31□□□□□ -0.6
COMMD4-201ENST00000267935 A0A087X0M5 115 aa11.3□□□□□ -0.6
COMMD4-201ENST00000267935 A0A1B0GX30 115 aa11.3□□□□□ -0.6
COMMD4-201ENST00000267935 M0R129 80 aa11.3□□□□□ -0.6
COMMD4-201ENST00000267935 MITFO75030 526 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-201ENST00000267935 CSN2P05814 226 aa11.3□□□□□ -0.6
COMMD4-201ENST00000267935 NHLRC4P0CG21 123 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-201ENST00000267935 NFYBP25208 207 aa11.3□□□□□ -0.6
COMMD4-201ENST00000267935 C21orf33P30042 268 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-201ENST00000267935 HES1Q14469 280 aa11.3□□□□□ -0.6
COMMD4-201ENST00000267935 C11orf87Q6NUJ2 197 aa11.3□□□□□ -0.6
COMMD4-201ENST00000267935 SAXO1Q8IYX7 474 aa11.3□□□□□ -0.6
COMMD4-201ENST00000267935 PRSS35Q8N3Z0 413 aa11.3□□□□□ -0.6
COMMD4-201ENST00000267935 OR8J1Q8NGP2 316 aa11.3□□□□□ -0.6
COMMD4-201ENST00000267935 TOMM40LQ969M1 308 aa11.3□□□□□ -0.6
COMMD4-201ENST00000267935 ADAT3Q96EY9 351 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-201ENST00000267935 MRPL48Q96GC5 212 aaKnown RBP11.3□□□□□ -0.6
COMMD4-201ENST00000267935 COMMD4Q9H0A8 199 aa11.3□□□□□ -0.6
COMMD4-201ENST00000267935 ZNF286AQ9HBT8 521 aa11.3□□□□□ -0.6
COMMD4-201ENST00000267935 KBTBD11-OT1A0A1B0GTJ5 212 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 FAM172BPA6NC97 362 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 LY6LH3BQJ8 138 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 RAMP3O60896 148 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 KDM4BO94953 1096 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 AMY1AP04745 511 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 AMY2AP04746 511 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 ISG15P05161 165 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 VSIG8P0DPA2 414 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 DBTP11182 482 aaKnown RBP11.29□□□□□ -0.6
COMMD4-201ENST00000267935 FASP25445 335 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 THBS3P49746 956 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 RPL23AP62750 156 aaKnown RBP11.29□□□□□ -0.6
COMMD4-201ENST00000267935 KDM4DQ6B0I6 523 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 ZNF329Q86UD4 541 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 FOXRED2Q8IWF2 684 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 OR2G2Q8NGZ5 317 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 HAVCR2Q8TDQ0 301 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 BARHL1Q9BZE3 327 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 ING3Q9NXR8 418 aa11.29□□□□□ -0.6
COMMD4-201ENST00000267935 IGKV1-9A0A0C4DH69 117 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 SH2D7A6NKC9 451 aaPredicted RBP11.28□□□□□ -0.6
COMMD4-201ENST00000267935 SERPINE3A8MV23 424 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 FGF16O43320 207 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 APOL3O95236 402 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 MT-ND2P03891 347 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 HTR1AP08908 422 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 TMEM225BP0DP42 221 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 TMEM11P17152 192 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 EPHA2P29317 976 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 RAB7AP51149 207 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 DGCR2P98153 550 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 MADCAM1Q13477 382 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 ATP6AP1Q15904 470 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 TP53I3Q53FA7 332 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 C10orf99Q6UWK7 81 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 BAIAP2L2Q6UXY1 529 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 SLC16A12Q6ZSM3 486 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 OR13C3Q8NGS6 347 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 TRUB1Q8WWH5 349 aaKnown RBP11.28□□□□□ -0.6
COMMD4-201ENST00000267935 RFT1Q96AA3 541 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 GON7Q9BXV9 100 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 NCOR1P1Q9H4R4 102 aa11.28□□□□□ -0.6
COMMD4-201ENST00000267935 DAPL1A0PJW8 107 aa11.27□□□□□ -0.61
COMMD4-201ENST00000267935 FAM90A18PA6NE21 464 aa11.27□□□□□ -0.61
COMMD4-201ENST00000267935 FAM90A16PA6NEW6 464 aa11.27□□□□□ -0.61
COMMD4-201ENST00000267935 ERICH4A6NGS2 130 aa11.27□□□□□ -0.61
COMMD4-201ENST00000267935 FAM90A20PA6NIJ5 464 aa11.27□□□□□ -0.61
COMMD4-201ENST00000267935 SNTNA6NMZ2 147 aa11.27□□□□□ -0.61
COMMD4-201ENST00000267935 FAM90A9PA6NNJ1 464 aa11.27□□□□□ -0.61
COMMD4-201ENST00000267935 FAM90A12PA8MX19 464 aa11.27□□□□□ -0.61
COMMD4-201ENST00000267935 FAM90A5PA8MXJ8 464 aa11.27□□□□□ -0.61
COMMD4-201ENST00000267935 J3QR06 171 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms