RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 ELOA3CA0A087WX78 387 aaPredicted RBP10.16□□□□□ -0.78
VPS33A-201ENST00000267199 MSGN1A6NI15 193 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF732B4DXR9 585 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 PTBP3O95758 552 aaKnown RBP10.16□□□□□ -0.78
VPS33A-201ENST00000267199 FOXK1P85037 733 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 UNQ9370/PRO34162Q6UXP9 181 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 SLC35G3Q8N808 338 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 ZNRF4Q8WWF5 429 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 C22orf15Q8WYQ4 148 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 DOK5Q9P104 306 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 MYLKQ15746 1914 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 SCN5AQ14524 2016 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 NKX2-6A6NCS4 301 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 CXorf65A6NEN9 183 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 H0YL77 283 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 OPN1MWP04001 364 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 PGA3P0DJD8 388 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 OPN1MW2P0DN77 364 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 OPN1MW3P0DN78 364 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF17P17021 662 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 MMP16P51512 607 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 HNRNPA3P51991 378 aaKnown RBP10.16□□□□□ -0.78
VPS33A-201ENST00000267199 DSCR4P56555 118 aaPredicted RBP10.16□□□□□ -0.78
VPS33A-201ENST00000267199 PKIAP61925 76 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 CLN3Q13286 438 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 ACOT6Q3I5F7 207 aaPredicted RBP10.16□□□□□ -0.78
VPS33A-201ENST00000267199 LINC01590Q5TEZ4 76 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 LIAT1Q6ZQX7 453 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 SLC36A1Q7Z2H8 476 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 OR1F12Q8NHA8 337 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 SPSB1Q96BD6 273 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 GPX7Q96SL4 187 aaPredicted RBP10.16□□□□□ -0.78
VPS33A-201ENST00000267199 FOXB1Q99853 325 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 A0A087WV48 116 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 OR7C2O60412 319 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 EFEMP2O95967 443 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 SEC11BP0C7V7 166 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 TPPP2P59282 170 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 HLA-BQ31612 363 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 TIGITQ495A1 244 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 WIPI1Q5MNZ9 446 aaPredicted RBP10.16□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF385CQ66K41 422 aaPredicted RBP10.16□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF774Q6NX45 483 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 TMPRSS7Q7RTY8 843 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 OR10A7Q8NGE5 316 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 OR2I1PQ8NGU4 316 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF721Q8TF20 911 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF107Q9UII5 783 aaPredicted RBP10.16□□□□□ -0.78
VPS33A-201ENST00000267199 DUSP13Q9UII6 198 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 EP300Q09472 2414 aaPredicted RBP10.16□□□□□ -0.78
VPS33A-201ENST00000267199 IL9P15248 144 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 PNLIPP16233 465 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 PPP1CCP36873 323 aaKnown RBP10.16□□□□□ -0.78
VPS33A-201ENST00000267199 B2MP61769 119 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 GAB4Q2WGN9 574 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 ANKRD55Q3KP44 614 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF260Q3ZCT1 412 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 SPINK9Q5DT21 86 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 LINC00469Q8N7U9 141 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 PCED1AQ9H1Q7 454 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 SLC35D1Q9NTN3 355 aa10.16□□□□□ -0.78
VPS33A-201ENST00000267199 RNF133Q8WVZ7 376 aa10.15□□□□□ -0.78
VPS33A-201ENST00000267199 LIN7CQ9NUP9 197 aaKnown RBP10.15□□□□□ -0.78
VPS33A-201ENST00000267199 TTRP02766 147 aa10.15□□□□□ -0.78
VPS33A-201ENST00000267199 IRF2P14316 349 aa10.15□□□□□ -0.78
VPS33A-201ENST00000267199 P2RY1P47900 373 aa10.15□□□□□ -0.78
VPS33A-201ENST00000267199 P2RY4P51582 365 aa10.15□□□□□ -0.78
VPS33A-201ENST00000267199 SLC38A11Q08AI6 406 aa10.15□□□□□ -0.78
VPS33A-201ENST00000267199 FFAR4Q5NUL3 377 aa10.15□□□□□ -0.78
VPS33A-201ENST00000267199 SPATA46Q5T0L3 261 aa10.15□□□□□ -0.78
VPS33A-201ENST00000267199 CYB5R2Q6BCY4 276 aa10.15□□□□□ -0.78
VPS33A-201ENST00000267199 PRR27Q6MZM9 219 aa10.15□□□□□ -0.78
VPS33A-201ENST00000267199 PINX1Q96BK5 328 aaKnown RBP10.15□□□□□ -0.78
VPS33A-201ENST00000267199 ARL2-SNX15V9GYD0 113 aa10.15□□□□□ -0.78
VPS33A-201ENST00000267199 PTPRDP23468 1912 aa10.15□□□□□ -0.78
VPS33A-201ENST00000267199 IGKV1D-42A0A075B6H8 117 aa10.15□□□□□ -0.79
VPS33A-201ENST00000267199 KIAA1324LA8MWY0 1029 aaPredicted RBP10.15□□□□□ -0.79
VPS33A-201ENST00000267199 TIMM8AO60220 97 aaPredicted RBP10.15□□□□□ -0.79
VPS33A-201ENST00000267199 ZNF32P17041 273 aa10.15□□□□□ -0.79
VPS33A-201ENST00000267199 FUT6P51993 359 aa10.15□□□□□ -0.79
VPS33A-201ENST00000267199 DHRS7BQ6IAN0 325 aaPredicted RBP10.15□□□□□ -0.79
VPS33A-201ENST00000267199 MYPOPQ86VE0 399 aaPredicted RBP10.15□□□□□ -0.79
VPS33A-201ENST00000267199 D2HGDHQ8N465 521 aa10.15□□□□□ -0.79
VPS33A-201ENST00000267199 OR13G1Q8NGZ3 307 aa10.15□□□□□ -0.79
VPS33A-201ENST00000267199 OR2T10Q8NGZ9 312 aa10.15□□□□□ -0.79
VPS33A-201ENST00000267199 OR6X1Q8NH79 312 aa10.15□□□□□ -0.79
VPS33A-201ENST00000267199 RASL10BQ96S79 203 aa10.15□□□□□ -0.79
VPS33A-201ENST00000267199 C17orf51A8MQB3 221 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 PDCD6O75340 191 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 IL11P20809 199 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 ERVFC1-1P60608 527 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 SURF2Q15527 256 aaPredicted RBP10.14□□□□□ -0.79
VPS33A-201ENST00000267199 C6orf15Q6UXA7 325 aaPredicted RBP10.14□□□□□ -0.79
VPS33A-201ENST00000267199 TIPARPQ7Z3E1 657 aaKnown RBP10.14□□□□□ -0.79
VPS33A-201ENST00000267199 TBC1D26Q86UD7 250 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 CARFQ8N187 725 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 PRSS50Q9UI38 385 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 GPR132Q9UNW8 380 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 MTCH2Q9Y6C9 303 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 TSC2P49815 1807 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms