RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 GLRX2Q9NS18 164 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 U3KQA8 63 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 C3orf85A0A1B0GTC6 90 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 NUDT19A8MXV4 375 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 SYNGR3O43761 229 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 GPR137BO60478 399 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 BCL3P20749 454 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 GLP1RP43220 463 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 HAAOP46952 286 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 NDUFA6P56556 154 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 MALLQ13021 153 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 ZNF818PQ6ZRF7 136 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 RPS19BP1Q86WX3 136 aaKnown RBP14.49□□□□□ -0.09
SQLE-201ENST00000265896 TMEM54Q969K7 222 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 CACNA1GO43497 2377 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 LY86O95711 162 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 MT-ND4LP03901 98 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 EDN3P14138 238 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 SURF2Q15527 256 aaPredicted RBP14.49□□□□□ -0.09
SQLE-201ENST00000265896 ZNF239Q16600 458 aaKnown RBP14.49□□□□□ -0.09
SQLE-201ENST00000265896 CLEC12BQ2HXU8 276 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 GFI1BQ5VTD9 330 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 LGI3Q8N145 548 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 OR2C3Q8N628 320 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 CPEB3Q8NE35 698 aaKnown RBP14.49□□□□□ -0.09
SQLE-201ENST00000265896 RDH5Q92781 318 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 PLEKHA2Q9HB19 425 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 ZNF286AQ9HBT8 521 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 CCL28Q9NRJ3 127 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 C19orf25Q9UFG5 118 aaPredicted RBP14.49□□□□□ -0.09
SQLE-201ENST00000265896 GTF3C1Q12789 2109 aa14.48□□□□□ -0.09
SQLE-201ENST00000265896 ARPC4-TTLL3A0A0A6YYG9 625 aa14.48□□□□□ -0.09
SQLE-201ENST00000265896 H7C1Q1 480 aa14.48□□□□□ -0.09
SQLE-201ENST00000265896 HMGB3O15347 200 aaKnown RBP14.48□□□□□ -0.09
SQLE-201ENST00000265896 DKK1O94907 266 aa14.48□□□□□ -0.09
SQLE-201ENST00000265896 GAPDHP04406 335 aaKnown RBP14.48□□□□□ -0.09
SQLE-201ENST00000265896 TCN2P20062 427 aa14.48□□□□□ -0.09
SQLE-201ENST00000265896 DYNLT3P51808 116 aa14.48□□□□□ -0.09
SQLE-201ENST00000265896 FGF8P55075 233 aaPredicted RBP14.48□□□□□ -0.09
SQLE-201ENST00000265896 RPS23P62266 143 aaKnown RBP14.48□□□□□ -0.09
SQLE-201ENST00000265896 TMEM267Q0VDI3 215 aaPredicted RBP14.48□□□□□ -0.09
SQLE-201ENST00000265896 FAM189A2Q15884 450 aa14.48□□□□□ -0.09
SQLE-201ENST00000265896 KMT5CQ86Y97 462 aa14.48□□□□□ -0.09
SQLE-201ENST00000265896 PHF7Q9BWX1 381 aaPredicted RBP14.48□□□□□ -0.09
SQLE-201ENST00000265896 SLC35B3Q9H1N7 401 aa14.48□□□□□ -0.09
SQLE-201ENST00000265896 FOXD3Q9UJU5 478 aaPredicted RBP14.48□□□□□ -0.09
SQLE-201ENST00000265896 ICE1Q9Y2F5 2266 aa14.48□□□□□ -0.09
SQLE-201ENST00000265896 CEP250Q9BV73 2442 aa14.48□□□□□ -0.09
SQLE-201ENST00000265896 WRBO00258 174 aa14.48□□□□□ -0.09
SQLE-201ENST00000265896 NKX2-1P43699 371 aaPredicted RBP14.48□□□□□ -0.09
SQLE-201ENST00000265896 SSR4P51571 173 aa14.48□□□□□ -0.09
SQLE-201ENST00000265896 CYB561D1Q8N8Q1 229 aa14.48□□□□□ -0.09
SQLE-201ENST00000265896 PISDQ9UG56 409 aa14.48□□□□□ -0.09
SQLE-201ENST00000265896 ZNF16P17020 682 aaPredicted RBP14.47□□□□□ -0.09
SQLE-201ENST00000265896 OTX1P32242 354 aaPredicted RBP14.47□□□□□ -0.09
SQLE-201ENST00000265896 FAM27BQ5VT28 67 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 OR56B2PQ8NGI1 322 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 EXTL1Q92935 676 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 C18orf12Q96KH6 178 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 FOXB1Q99853 325 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 ARGFXA6NJG6 315 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 PROB1E7EW31 1015 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 MPPED1O15442 326 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 CRYGSP22914 178 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 TAGLN2P37802 199 aaKnown RBP14.47□□□□□ -0.09
SQLE-201ENST00000265896 ALDH3B1P43353 468 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 C3AR1Q16581 482 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 C10orf128Q5T292 105 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 ZNF561Q8N587 486 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 TCEAL3Q969E4 200 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 BOD1Q96IK1 185 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 WNT5BQ9H1J7 359 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 BCO1Q9HAY6 547 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 SEMA5BQ9P283 1151 aa14.47□□□□□ -0.09
SQLE-201ENST00000265896 IGLV3-32A0A0A0MS00 114 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 IGHV1-45A0A0A0MS14 117 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 TGIF2-C20orf24A0A0A6YYL0 155 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 IFNA4P05014 189 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 COX6A1P12074 109 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 RND3P61587 244 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 DAZAP2Q15038 168 aaPredicted RBP14.46□□□□□ -0.09
SQLE-201ENST00000265896 ZNF674Q2M3X9 581 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 MRPL14Q6P1L8 145 aaKnown RBP14.46□□□□□ -0.09
SQLE-201ENST00000265896 OR10D3Q8NH80 312 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 RNF138Q8WVD3 245 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 TMEM38BQ9NVV0 291 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 DMXL2Q8TDJ6 3036 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 CHST1O43916 411 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 NGFP01138 241 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 CXCL1P09341 107 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 CTSSP25774 331 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 VAMP2P63027 116 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 KIAA0141Q14154 515 aaPredicted RBP14.46□□□□□ -0.09
SQLE-201ENST00000265896 CNN3Q15417 329 aaKnown RBP14.46□□□□□ -0.09
SQLE-201ENST00000265896 SPATA46Q5T0L3 261 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 SLC25A24Q6NUK1 477 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 ADPRHL1Q8NDY3 354 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 OR1K1Q8NGR3 316 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 RAB39BQ96DA2 213 aa14.46□□□□□ -0.09
SQLE-201ENST00000265896 COL5A1P20908 1838 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms