RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 A0A1W2PPC1 479 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 TGOLN2O43493 480 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 LTBRP36941 435 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 UBE2G2P60604 165 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 SSTP61278 116 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 ARL16Q0P5N6 197 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 DBX2Q6ZNG2 339 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 NECAP1Q8NC96 275 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 MITD1Q8WV92 249 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 LURAP1Q96LR2 239 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 PPP1R3EQ9H7J1 279 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 ONECUT1Q9UBC0 465 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 COX7A2P2O60397 106 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 HNF1AP20823 631 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 OR2B8PP59922 312 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 ZNF90Q03938 601 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 SLC38A11Q08AI6 406 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 IL13RA2Q14627 380 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 PIGYQ3MUY2 71 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 TMEM251Q8N6I4 163 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 OR5A2Q8NGI9 324 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 TRAF4Q9BUZ4 470 aaPredicted RBP12.26□□□□□ -0.45
CDH3-201ENST00000264012 PRR13Q9NZ81 148 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 DVL1O14640 695 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 PPIHO43447 177 aaKnown RBP12.26□□□□□ -0.45
CDH3-201ENST00000264012 DVL1P1P54792 670 aaPredicted RBP12.26□□□□□ -0.45
CDH3-201ENST00000264012 BPIFCQ8NFQ6 507 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 C2CD4CQ8TF44 421 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 DDA1Q9BW61 102 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 FBXL17Q9UF56 701 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 CRYM-AS1A6NIL9 109 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 RNASEK-C17orf49H0YIS7 233 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 INO80CQ6PI98 192 aaPredicted RBP12.25□□□□□ -0.45
CDH3-201ENST00000264012 C9orf62Q8N4C0 152 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 SLC25A40Q8TBP6 338 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 TMEM56Q96MV1 263 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 MRPS18BQ9Y676 258 aaKnown RBP12.25□□□□□ -0.45
CDH3-201ENST00000264012 ZNF205O95201 554 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 MPV17LQ2QL34 196 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 TMEM230Q96A57 120 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 RPEQ96AT9 228 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 AKR1E2Q96JD6 320 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 KCNK17Q96T54 332 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 CABLES2Q9BTV7 478 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 HAND1O96004 215 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 FOXO1Q12778 655 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 TBC1D26Q86UD7 250 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 MDP1Q86V88 176 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 COMMD1Q8N668 190 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 OR13D1Q8NGV5 346 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 RND1Q92730 232 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 PHYHIPLQ96FC7 376 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 HES4Q9HCC6 221 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 IGLV1-36A0A0B4J1U3 117 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 PPYP01298 95 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 CD3EP07766 207 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 FTH1P19P0C7X4 201 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 ROM1Q03395 351 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 GUK1Q16774 197 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 NCR3LG1Q68D85 454 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 SLC25A42Q86VD7 318 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 SKA3Q8IX90 412 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 OR51I2Q9H344 312 aa12.25□□□□□ -0.45
CDH3-201ENST00000264012 METTL15P1P0C7V9 234 aa12.24□□□□□ -0.45
CDH3-201ENST00000264012 POLR2GP62487 172 aaKnown RBP eCLIP12.24□□□□□ -0.45
CDH3-201ENST00000264012 RYDENQ9NUL5 291 aaKnown RBP12.24□□□□□ -0.45
CDH3-201ENST00000264012 C20orf202A1L168 122 aa12.24□□□□□ -0.45
CDH3-201ENST00000264012 LY86O95711 162 aa12.24□□□□□ -0.45
CDH3-201ENST00000264012 CRHP06850 196 aa12.24□□□□□ -0.45
CDH3-201ENST00000264012 PGA4P0DJD7 388 aa12.24□□□□□ -0.45
CDH3-201ENST00000264012 ZNF574Q6ZN55 896 aaPredicted RBP12.24□□□□□ -0.45
CDH3-201ENST00000264012 CXorf58Q96LI9 332 aa12.24□□□□□ -0.45
CDH3-201ENST00000264012 SLC7A10Q9NS82 523 aa12.24□□□□□ -0.45
CDH3-201ENST00000264012 PSG4Q00888 419 aa12.24□□□□□ -0.45
CDH3-201ENST00000264012 BTNL8Q6UX41 500 aa12.24□□□□□ -0.45
CDH3-201ENST00000264012 MOGAT3Q86VF5 341 aa12.24□□□□□ -0.45
CDH3-201ENST00000264012 FAM181AQ8N9Y4 354 aa12.24□□□□□ -0.45
CDH3-201ENST00000264012 TMEM104Q8NE00 496 aa12.24□□□□□ -0.45
CDH3-201ENST00000264012 PTX4Q96A99 478 aa12.24□□□□□ -0.45
CDH3-201ENST00000264012 SPSB2Q99619 263 aa12.24□□□□□ -0.45
CDH3-201ENST00000264012 OPN4Q9UHM6 478 aa12.24□□□□□ -0.45
CDH3-201ENST00000264012 IGKV1D-42A0A075B6H8 117 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 AARDQ4LEZ3 155 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 A0A0U1RQV5 110 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 IGKV3-11P04433 115 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 TMEM33P57088 247 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 PJVKQ0ZLH3 352 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 PGLYRP3Q96LB9 341 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 IL36GQ9NZH8 169 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 TRAV38-1A0A0B4J264 116 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 NCBP2LA6PVI3 153 aaKnown RBP12.23□□□□□ -0.45
CDH3-201ENST00000264012 CYTIPO60759 359 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 SFTA3P0C7M3 94 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 FSTP19883 344 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 LIAT1Q6ZQX7 453 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 LRFN3Q9BTN0 628 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 ABCA7Q8IZY2 2146 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 TRBV5-5A0A0J9YX44 114 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 MS4A18H0YCH9 400 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 MS4A18Q3C1V0 323 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms