RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 AAMDCQ9H7C9 122 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 TNFRSF19Q9NS68 423 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 VN1R4Q7Z5H5 301 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 KISS1RQ969F8 398 aaPredicted RBP10.65□□□□□ -0.7
SMG6-201ENST00000263073 OR10C1Q96KK4 312 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 OR2A5Q96R48 311 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 KLHDC2Q9Y2U9 406 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 RPS23P62266 143 aaKnown RBP10.65□□□□□ -0.7
SMG6-201ENST00000263073 RUNX1Q01196 453 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 GUSBP11Q6P575 273 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 C16orf82Q7Z2V1 217 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 OR8A1Q8NGG7 326 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 WDR61Q9GZS3 305 aaKnown RBP10.65□□□□□ -0.7
SMG6-201ENST00000263073 IGLV3-16A0A075B6K0 115 aa10.65□□□□□ -0.71
SMG6-201ENST00000263073 PMS2P1A4D2B8 440 aa10.65□□□□□ -0.71
SMG6-201ENST00000263073 CXorf65A6NEN9 183 aa10.65□□□□□ -0.71
SMG6-201ENST00000263073 OGG1O15527 345 aa10.65□□□□□ -0.71
SMG6-201ENST00000263073 PDCD6O75340 191 aa10.65□□□□□ -0.71
SMG6-201ENST00000263073 CFDP00746 253 aaPredicted RBP10.65□□□□□ -0.71
SMG6-201ENST00000263073 PRSS1P07477 247 aa10.65□□□□□ -0.71
SMG6-201ENST00000263073 FAM87AP0C7U9 286 aa10.65□□□□□ -0.71
SMG6-201ENST00000263073 SMIM6P0DI80 62 aa10.65□□□□□ -0.71
SMG6-201ENST00000263073 OR1C1Q15619 314 aa10.65□□□□□ -0.71
SMG6-201ENST00000263073 RBM14Q96PK6 669 aaKnown RBP10.65□□□□□ -0.71
SMG6-201ENST00000263073 SIPA1L3O60292 1781 aaPredicted RBP10.65□□□□□ -0.71
SMG6-201ENST00000263073 C1QL1O75973 258 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 KLK2P20151 261 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 SUCLG1P53597 346 aaKnown RBP10.64□□□□□ -0.71
SMG6-201ENST00000263073 IFITM2Q01629 132 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 SKP2Q13309 424 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 SLC25A42Q86VD7 318 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 ARL6IP6Q8N6S5 226 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 LRRC75AQ8NAA5 344 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 OR2D3Q8NGH3 330 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 ASB10Q8WXI3 467 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 STARD4Q96DR4 205 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 OR5AC2Q9NZP5 309 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 ARID1AO14497 2285 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 ELOA3CA0A087WX78 387 aaPredicted RBP10.64□□□□□ -0.71
SMG6-201ENST00000263073 SPTY2D1-AS1A0A0U1RR47 76 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 GABRG2P18507 467 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 MRGPRFQ96AM1 343 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 ANXA10Q9UJ72 324 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 OR5B21A6NL26 309 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 CYC1P08574 325 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 UQCRFS1P47985 274 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 PSMB2P49721 201 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 SPCS3P61009 180 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 UBE2L3P68036 154 aaKnown RBP10.64□□□□□ -0.71
SMG6-201ENST00000263073 OR5AU1Q8NGC0 362 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 LHFPL5Q8TAF8 219 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 TBX15Q96SF7 602 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 RCC2Q9P258 522 aaKnown RBP10.64□□□□□ -0.71
SMG6-201ENST00000263073 THSD7AQ9UPZ6 1657 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 LOC389332A0A1B0GUA5 103 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 C2CD4DB7Z1M9 353 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 SP1P08047 785 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 ANKRD37Q7Z713 158 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 OR10G8Q8NGN5 311 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 LRRC29Q8WV35 223 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 CCL17Q92583 94 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 MRGPRX3Q96LB0 322 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 TMEM147Q9BVK8 224 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 TMSB15BA0A087X1C1 80 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 CYR61O00622 381 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 CTDSPLO15194 276 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 WNT5AP41221 380 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 P2RY1P47900 373 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 OR10D3Q8NH80 312 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 RPS4Y2Q8TD47 263 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 PIK3IP1Q96FE7 263 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 STARD10Q9Y365 291 aa10.64□□□□□ -0.71
SMG6-201ENST00000263073 SSC5DA1L4H1 1573 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 SNURFLB1AK76 121 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 PKIAP61925 76 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 RHOBP62745 196 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 IRF3Q14653 427 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 ELOBQ15370 118 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 TMEM255AQ5JRV8 349 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 ELF5Q9UKW6 265 aaPredicted RBP10.63□□□□□ -0.71
SMG6-201ENST00000263073 SLC45A2Q9UMX9 530 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 IGKV3-7A0A075B6H7 116 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 CRXO43186 299 aaPredicted RBP10.63□□□□□ -0.71
SMG6-201ENST00000263073 OR2I1PQ8NGU4 316 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 TRGV8A0A0C4DH27 118 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 C5orf52A6NGY3 159 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 PRRG2O14669 202 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 HLA-GP17693 338 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 NANOS3P60323 173 aaKnown RBP10.63□□□□□ -0.71
SMG6-201ENST00000263073 JMJD6Q6NYC1 403 aaPredicted RBP10.63□□□□□ -0.71
SMG6-201ENST00000263073 OR4F17Q8NGA8 305 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 MS4A3Q96HJ5 214 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 MRPS18BQ9Y676 258 aaKnown RBP10.63□□□□□ -0.71
SMG6-201ENST00000263073 OR4C46A6NHA9 309 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 SYNGR2O43760 224 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 HRASP01112 189 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 TRGC2P03986 189 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 CTSDP07339 412 aaPredicted RBP10.63□□□□□ -0.71
SMG6-201ENST00000263073 FBP1P09467 338 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 SOSTQ9BQB4 213 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms