RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 TCN2P20062 427 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 GABRR1P24046 479 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 FHITP49789 147 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 MTCP1P56278 107 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 CD81P60033 236 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 LPAL2Q16609 132 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 KRTAP27-1Q3LI81 207 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 SOHLH1Q5JUK2 328 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 WIPI1Q5MNZ9 446 aaPredicted RBP19.56■□□□□ 0.72
MCF2L-201ENST00000261963 OR10D3Q8NH80 312 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 SSX3Q99909 188 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 C1orf123Q9NWV4 160 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 COL27A1Q8IZC6 1860 aaPredicted RBP19.56■□□□□ 0.72
MCF2L-201ENST00000261963 IGKV1-27A0A075B6S5 117 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 OR6C6A6NF89 314 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 DHRS7CA6NNS2 312 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 TSTD3H0UI37 97 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 PRH1P02810 166 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 ACP1P24666 158 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 GAMTQ14353 236 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 AAED1Q7RTV5 226 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 OR2V1Q8NHB1 315 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 RHBDD1Q8TEB9 315 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 HDHD3Q9BSH5 251 aaPredicted RBP19.56■□□□□ 0.72
MCF2L-201ENST00000261963 PLEKHA2Q9HB19 425 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 LOXL2Q9Y4K0 774 aa19.56■□□□□ 0.72
MCF2L-201ENST00000261963 LSM5Q9Y4Y9 91 aaKnown RBP19.56■□□□□ 0.72
MCF2L-201ENST00000261963 A0A087X0M5 115 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 BORCS7-ASMTA0A0B4J1R7 106 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 A0A1B0GX30 115 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 PINLYPA6NC86 204 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 ANGPTL7O43827 346 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 RGS19P49795 217 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 ZXDAP98168 799 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 SUMF2Q8NBJ7 301 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 ERGIC1Q969X5 290 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 SPSB1Q96BD6 273 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 STRAPQ9Y3F4 350 aaKnown RBP19.55■□□□□ 0.72
MCF2L-201ENST00000261963 TMEM225BP0DP42 221 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 RBMXP38159 391 aaKnown RBP19.55■□□□□ 0.72
MCF2L-201ENST00000261963 SURF2Q15527 256 aaPredicted RBP19.55■□□□□ 0.72
MCF2L-201ENST00000261963 CHRFAM7AQ494W8 412 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 TCEAL6Q6IPX3 200 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 SPNS3Q6ZMD2 512 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 FGFBP3Q8TAT2 258 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 FNDC9Q8TBE3 224 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 ZNF701Q9NV72 531 aaPredicted RBP19.55■□□□□ 0.72
MCF2L-201ENST00000261963 ZNF581Q9P0T4 197 aa19.55■□□□□ 0.72
MCF2L-201ENST00000261963 PPP1R2P9O14990 202 aa19.54■□□□□ 0.72
MCF2L-201ENST00000261963 TRAPPC6AO75865 159 aa19.54■□□□□ 0.72
MCF2L-201ENST00000261963 ARL6IP1Q15041 203 aa19.54■□□□□ 0.72
MCF2L-201ENST00000261963 C6orf15Q6UXA7 325 aaPredicted RBP19.54■□□□□ 0.72
MCF2L-201ENST00000261963 EMG1Q92979 244 aaKnown RBP19.54■□□□□ 0.72
MCF2L-201ENST00000261963 BTBD17A6NE02 478 aa19.54■□□□□ 0.72
MCF2L-201ENST00000261963 ZNF587BE7ETH6 402 aa19.54■□□□□ 0.72
MCF2L-201ENST00000261963 SPRY1O43609 319 aaPredicted RBP19.54■□□□□ 0.72
MCF2L-201ENST00000261963 LCATP04180 440 aa19.54■□□□□ 0.72
MCF2L-201ENST00000261963 PSG4Q00888 419 aa19.54■□□□□ 0.72
MCF2L-201ENST00000261963 PPA1Q15181 289 aa19.54■□□□□ 0.72
MCF2L-201ENST00000261963 PLEKHJ1Q9NW61 149 aa19.54■□□□□ 0.72
MCF2L-201ENST00000261963 DCAF16Q9NXF7 216 aa19.54■□□□□ 0.72
MCF2L-201ENST00000261963 TUBD1Q9UJT1 453 aa19.54■□□□□ 0.72
MCF2L-201ENST00000261963 ZDHHC8Q9ULC8 765 aa19.54■□□□□ 0.72
MCF2L-201ENST00000261963 ELOA3CA0A087WX78 387 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-201ENST00000261963 FAM230AA0A1W2PPH8 454 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 RPL36A-HNRNPH2H7BZ11 118 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 KNG1P01042 644 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 SPCS3P61009 180 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 TMEM105Q8N8V8 129 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 LFNGQ8NES3 379 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 PSMF1Q92530 271 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 FOXB1Q99853 325 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 GINS3Q9BRX5 216 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 WNT5BQ9H1J7 359 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 HIST1H2BKO60814 126 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 SERPINA7P05543 415 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 HIST1H2BJP06899 126 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 HIST1H2BOP23527 126 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 HIST1H2BBP33778 126 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 HIST1H2BDP58876 126 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 HIST1H2BCP62807 126 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 SSPNQ14714 243 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 HIST2H2BEQ16778 126 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 CEACAM16Q2WEN9 425 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-201ENST00000261963 CLEC9AQ6UXN8 241 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 HIST3H2BBQ8N257 126 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 HIST1H2BHQ93079 126 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 LURAP1Q96LR2 239 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 HIST1H2BNQ99877 126 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 HIST1H2BMQ99879 126 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 GPR61Q9BZJ8 451 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 P4HTMQ9NXG6 502 aa19.53■□□□□ 0.72
MCF2L-201ENST00000261963 C14orf166Q9Y224 244 aaKnown RBP19.53■□□□□ 0.72
MCF2L-201ENST00000261963 A0A1B0GW64 132 aa19.52■□□□□ 0.72
MCF2L-201ENST00000261963 ZNF727A8MUV8 499 aa19.52■□□□□ 0.72
MCF2L-201ENST00000261963 C1QL1O75973 258 aa19.52■□□□□ 0.72
MCF2L-201ENST00000261963 LMO1P25800 156 aa19.52■□□□□ 0.72
MCF2L-201ENST00000261963 LBHQ53QV2 105 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-201ENST00000261963 RTL6Q6ICC9 239 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms