RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 HSPB2A8KAH6 182 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 HSPB2Q16082 182 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 MS4A7Q9GZW8 240 aaPredicted RBP10.7□□□□□ -0.7
SPG11-201ENST00000261866 IGKV1D-16P01601 117 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 ACSM4P0C7M7 580 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 NAT2P11245 290 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 OR5A2Q8NGI9 324 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 IGHV1-45A0A0A0MS14 117 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 CTAG2O75638 210 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 SLC38A11Q08AI6 406 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 PPP1R1AQ13522 171 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 GPR27Q9NS67 375 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 UBR3Q6ZT12 1888 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 TAS2R60P59551 318 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 MGAT2Q10469 447 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 ETV3LQ6ZN32 361 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 ZPLD1Q8TCW7 415 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 SP7Q8TDD2 431 aaPredicted RBP10.69□□□□□ -0.7
SPG11-201ENST00000261866 PTP4A1Q93096 173 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 RNF7Q9UBF6 113 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 RABAC1Q9UI14 185 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 LAMP3Q9UQV4 416 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 PNPP00491 289 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 ANKRD34CP0C6C1 535 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 ATG4DQ86TL0 474 aaPredicted RBP10.69□□□□□ -0.7
SPG11-201ENST00000261866 CABLES2Q9BTV7 478 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 PRSS50Q9UI38 385 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 ZNF841Q6ZN19 808 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 FOXJ2Q9P0K8 574 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 TDRD6O60522 2096 aaKnown RBP10.69□□□□□ -0.7
SPG11-201ENST00000261866 UPK3AO75631 287 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 LALBAP00709 142 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 PMELP40967 661 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 MVDP53602 400 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 TMEM128Q5BJH2 165 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 CDCP2Q5VXM1 449 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 NCR3LG1Q68D85 454 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 OR4C5Q8NGB2 326 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 WDR34Q96EX3 536 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 LOC389332A0A1B0GUA5 103 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 KIAA1324LA8MWY0 1029 aaPredicted RBP10.69□□□□□ -0.7
SPG11-201ENST00000261866 TAAR5O14804 337 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 CEACAM3P40198 252 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 COL10A1Q03692 680 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 RBPMS2Q6ZRY4 209 aaKnown RBP10.69□□□□□ -0.7
SPG11-201ENST00000261866 OR10A7Q8NGE5 316 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 PARD6AQ9NPB6 346 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 FRRS1LQ9P0K9 344 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 IL17BQ9UHF5 180 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 TTRP02766 147 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 HOXC8P31273 242 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 HNRNPA3P51991 378 aaKnown RBP10.69□□□□□ -0.7
SPG11-201ENST00000261866 TMEM97Q5BJF2 176 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 TBC1D26Q86UD7 250 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 OR5C1Q8NGR4 320 aa10.69□□□□□ -0.7
SPG11-201ENST00000261866 ZNF501Q96CX3 271 aaPredicted RBP10.69□□□□□ -0.7
SPG11-201ENST00000261866 TMSB15BA0A087X1C1 80 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 IGHA1P01876 353 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 IGHA2P01877 340 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 FGF2P09038 288 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 NHLRC1Q6VVB1 395 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 CCL13Q99616 98 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 SEBOXQ9HB31 216 aaPredicted RBP10.68□□□□□ -0.7
SPG11-201ENST00000261866 C5orf52A6NGY3 159 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 PRR19A6NJB7 356 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 GCSHP23434 173 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 NHLRC2Q8NBF2 726 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 KCNMB2Q9Y691 235 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 RAB7AP51149 207 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 SLC16A12Q6ZSM3 486 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 OR1K1Q8NGR3 316 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 HDHD3Q9BSH5 251 aaPredicted RBP10.68□□□□□ -0.7
SPG11-201ENST00000261866 CXorf51AA0A1B0GTR3 108 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 FPR2P25090 351 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 TRAPPC1Q9Y5R8 145 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 LY6EQ16553 131 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 CLN8Q9UBY8 286 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 INSIG2Q9Y5U4 225 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 SLC25A30Q5SVS4 291 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 C10orf111Q8N326 155 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 OR4D10Q8NGI6 311 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 TMEM37Q8WXS4 190 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 UQCC1Q9NVA1 299 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 PILRBQ9UKJ0 227 aa10.68□□□□□ -0.7
SPG11-201ENST00000261866 PDCD6O75340 191 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 PTBP1P26599 531 aaKnown RBP eCLIP10.67□□□□□ -0.71e-7■■□□□ 13.3
SPG11-201ENST00000261866 CRYBB2P43320 205 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 TCL1AP56279 114 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 MYPOPQ86VE0 399 aaPredicted RBP10.67□□□□□ -0.7
SPG11-201ENST00000261866 LFNGQ8NES3 379 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 OR52L2PQ8NGH6 319 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 PLEKHA2Q9HB19 425 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 TCRBV16S1A1N1A0A5B0 115 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 MBP02144 154 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 CD37P11049 281 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 R3HDM4Q96D70 268 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 FFAR1O14842 300 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 ID4P47928 161 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 MMP15P51511 669 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 SSMEM1Q8WWF3 244 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms