RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 FAM157AC9JC47 383 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 MS4A18H0YCH9 400 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 TRAF3IP2O43734 574 aaPredicted RBP12.14□□□□□ -0.47
CDH1-201ENST00000261769 MS4A18Q3C1V0 323 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 SOHLH1Q5JUK2 328 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 TEX30Q5JUR7 227 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 LRRTM1Q86UE6 522 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 PATJQ8NI35 1801 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 CYB5R1Q9UHQ9 305 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 MRPS18CQ9Y3D5 142 aaKnown RBP12.14□□□□□ -0.47
CDH1-201ENST00000261769 A0A1B0GVG6 124 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 GEMIN2O14893 280 aaKnown RBP12.14□□□□□ -0.47
CDH1-201ENST00000261769 OR7C2O60412 319 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 GABRB1P18505 474 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 PDLIM4P50479 330 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 HMGN3Q15651 99 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 SSX2Q16385 188 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 CTF1Q16619 201 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 SRXN1Q9BYN0 137 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 GPR27Q9NS67 375 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 PIPOXQ9P0Z9 390 aa12.14□□□□□ -0.47
CDH1-201ENST00000261769 C17orf82Q86X59 251 aaPredicted RBP12.13□□□□□ -0.47
CDH1-201ENST00000261769 MS4A3Q96HJ5 214 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 TNFRSF19Q9NS68 423 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 ANXA10Q9UJ72 324 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 ZNF318Q5VUA4 2279 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 RFPL3SP0C7P2 107 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 RRASP10301 218 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 UBE2G2P60604 165 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 S100A12P80511 92 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 C19orf57Q0VDD7 668 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 HABP2Q14520 560 aaPredicted RBP12.13□□□□□ -0.47
CDH1-201ENST00000261769 IL13RA2Q14627 380 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 PXDC1Q5TGL8 231 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 FAHD2BQ6P2I3 314 aaPredicted RBP12.13□□□□□ -0.47
CDH1-201ENST00000261769 OR8G5Q8NG78 346 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 ITLN1Q8WWA0 313 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 TMEM45BQ96B21 275 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 FAHD2AQ96GK7 314 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 CD80P33681 288 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 UBE2KP61086 200 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 MRPS18AQ9NVS2 196 aaKnown RBP12.13□□□□□ -0.47
CDH1-201ENST00000261769 ATPIF1Q9UII2 106 aa12.13□□□□□ -0.47
CDH1-201ENST00000261769 SNAPINO95295 136 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 ACSM6Q6P461 480 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 UNQ6494/PRO21346Q6UXR6 183 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 MUC15Q8N387 334 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 MARS2Q96GW9 593 aaKnown RBP12.12□□□□□ -0.47
CDH1-201ENST00000261769 SOX7Q9BT81 388 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 RBP4P02753 201 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 TTRP02766 147 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 PMELP40967 661 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 FBP1P09467 338 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 LINC00303Q3SY05 128 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 TIGITQ495A1 244 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 KDF1Q8NAX2 398 aaPredicted RBP12.12□□□□□ -0.47
CDH1-201ENST00000261769 RAB40CQ96S21 281 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 ZNF552Q9H707 407 aaPredicted RBP12.12□□□□□ -0.47
CDH1-201ENST00000261769 ZNF785A8K8V0 405 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 B3GALNT1O75752 331 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 MGST1P10620 155 aaKnown RBP12.12□□□□□ -0.47
CDH1-201ENST00000261769 OPRK1P41145 380 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 NFAM1Q8NET5 270 aaPredicted RBP12.12□□□□□ -0.47
CDH1-201ENST00000261769 KLK13Q9UKR3 277 aa12.12□□□□□ -0.47
CDH1-201ENST00000261769 FLI1Q01543 452 aaPredicted RBP12.11□□□□□ -0.47
CDH1-201ENST00000261769 INSL4Q14641 139 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 ZBTB34Q8NCN2 500 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 C1orf162Q8NEQ5 155 aaPredicted RBP12.11□□□□□ -0.47
CDH1-201ENST00000261769 FLVCR2Q9UPI3 526 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 C3orf85A0A1B0GTC6 90 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 SEMA7AO75326 666 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 ROM1Q03395 351 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 SURF2Q15527 256 aaPredicted RBP12.11□□□□□ -0.47
CDH1-201ENST00000261769 TNXAQ16473 311 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 XAF1Q6GPH4 301 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 CCDC190Q86UF4 302 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 LHX4Q969G2 390 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 MISP3Q96FF7 219 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 WDFY2Q96P53 400 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 NIPSNAP3BQ9BS92 247 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 TIMM9Q9Y5J7 89 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 IGHV3OR15-7A0A075B7D8 119 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 IGLV1-36A0A0B4J1U3 117 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 CLN5O75503 358 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 CRYZL1O95825 349 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 IGHV3-13P01766 116 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 IGHV3-7P01780 117 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 SEMG1P04279 462 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 ZNF485Q8NCK3 441 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 OR52L2PQ8NGH6 319 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 CCL19Q99731 98 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 SDK2Q58EX2 2172 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 A1L4Q6 167 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 ZNF708P17019 499 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 SP6Q3SY56 376 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 LINC01560Q8TB33 94 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 NAA60Q9H7X0 242 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 RNF122Q9H9V4 155 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 MIOXQ9UGB7 285 aa12.11□□□□□ -0.47
CDH1-201ENST00000261769 THADAQ6YHU6 1953 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms