RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 OR2I1PQ8NGU4 316 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 PIK3IP1Q96FE7 263 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 IFT22Q9H7X7 185 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 CYSLTR2Q9NS75 346 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 PDCD6O75340 191 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 SLC25A1P53007 311 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 SSPNQ14714 243 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 PTPMT1Q8WUK0 201 aaPredicted RBP12.65□□□□□ -0.38
CUX2-201ENST00000261726 TMEM191AQ9H0A3 160 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 TECRQ9NZ01 308 aaKnown RBP12.65□□□□□ -0.38
CUX2-201ENST00000261726 NRXN2Q9P2S2 1712 aa12.65□□□□□ -0.38
CUX2-201ENST00000261726 GEMIN2O14893 280 aaKnown RBP12.65□□□□□ -0.39
CUX2-201ENST00000261726 ZNF253O75346 499 aa12.65□□□□□ -0.39
CUX2-201ENST00000261726 C9orf50Q5SZB4 431 aa12.65□□□□□ -0.39
CUX2-201ENST00000261726 GPR27Q9NS67 375 aa12.65□□□□□ -0.39
CUX2-201ENST00000261726 KCNMB2Q9Y691 235 aa12.65□□□□□ -0.39
CUX2-201ENST00000261726 LOC389332A0A1B0GUA5 103 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 IL13RA2Q14627 380 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 FOXB2Q5VYV0 432 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 C12orf73Q69YU5 71 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 Q6ZNB5 142 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 PRSS42Q7Z5A4 293 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 TCFL5Q9UL49 500 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 SCGB1A1P11684 91 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 HLA-DRB3P79483 266 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 C19orf57Q0VDD7 668 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 ANKRD55Q3KP44 614 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 FAM109BQ6ICB4 259 aaPredicted RBP12.64□□□□□ -0.39
CUX2-201ENST00000261726 MOGAT3Q86VF5 341 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 MYOZ3Q8TDC0 251 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 DNAJB12Q9NXW2 375 aaKnown RBP12.64□□□□□ -0.39
CUX2-201ENST00000261726 C11orf94C9JXX5 98 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 RGS13O14921 159 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 MPC2O95563 127 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 ZNF137PP52743 207 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 B4GALNT1Q00973 533 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 NCMAPQ5T1S8 102 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 LRRC37AA6NMS7 1700 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 IL11RAQ14626 422 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 EAF1Q96JC9 268 aaPredicted RBP12.64□□□□□ -0.39
CUX2-201ENST00000261726 TMEM167BQ9NRX6 74 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 H7C2G1 150 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 ZFPL1O95159 310 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 HLA-GP17693 338 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 KIR2DL1P43626 348 aaPredicted RBP12.64□□□□□ -0.39
CUX2-201ENST00000261726 KIR2DL2P43627 348 aaPredicted RBP12.64□□□□□ -0.39
CUX2-201ENST00000261726 RIGQ13278 110 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 OR2D3Q8NGH3 330 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 OR1N2Q8NGR9 330 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 PRDM7Q9NQW5 492 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 NAT8Q9UHE5 227 aa12.64□□□□□ -0.39
CUX2-201ENST00000261726 DOCK1Q14185 1865 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 RBFOX3A6NFN3 312 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 M0R143 59 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 ARG1P05089 322 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 GABRA1P14867 456 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 SEZ6L2Q6UXD5 910 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 ZFP64Q9NPA5 681 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 SLC17A5Q9NRA2 495 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 GP1BAP07359 652 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 INHBBP09529 407 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 SUCLG1P53597 346 aaKnown RBP12.63□□□□□ -0.39
CUX2-201ENST00000261726 NAAAQ02083 359 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 MOGAT1Q96PD6 335 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 WDR13Q9H1Z4 485 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 SLC6A13Q9NSD5 602 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 IGHV3OR15-7A0A075B7D8 119 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 TRBV5-4A0A0C4DH59 114 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 AP4M1O00189 453 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 WNT5AP41221 380 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 RAE1P78406 368 aaKnown RBP12.63□□□□□ -0.39
CUX2-201ENST00000261726 AKIRIN1Q9H9L7 192 aaPredicted RBP12.63□□□□□ -0.39
CUX2-201ENST00000261726 Q9N2K0 584 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 MANBALQ9NQG1 85 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 IGSF23A1L1A6 192 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 CLLU1Q5K131 121 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 SLC16A13Q7RTY0 426 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 AMER3Q8N944 861 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 MRM1Q6IN84 353 aaKnown RBP12.63□□□□□ -0.39
CUX2-201ENST00000261726 OR8I2Q8N0Y5 310 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 TMEM251Q8N6I4 163 aa12.63□□□□□ -0.39
CUX2-201ENST00000261726 PLPP3O14495 311 aa12.62□□□□□ -0.39
CUX2-201ENST00000261726 STAG3L2P0CL84 134 aa12.62□□□□□ -0.39
CUX2-201ENST00000261726 ADIPOQQ15848 244 aa12.62□□□□□ -0.39
CUX2-201ENST00000261726 ATP6V1FQ16864 119 aa12.62□□□□□ -0.39
CUX2-201ENST00000261726 OR10G8Q8NGN5 311 aa12.62□□□□□ -0.39
CUX2-201ENST00000261726 FAM222BQ8WU58 562 aa12.62□□□□□ -0.39
CUX2-201ENST00000261726 MIEN1Q9BRT3 115 aa12.62□□□□□ -0.39
CUX2-201ENST00000261726 ZNF275Q9NSD4 429 aaPredicted RBP12.62□□□□□ -0.39
CUX2-201ENST00000261726 LPAR3Q9UBY5 353 aa12.62□□□□□ -0.39
CUX2-201ENST00000261726 CDKN2AP42771 156 aaKnown RBP12.62□□□□□ -0.39
CUX2-201ENST00000261726 TRIP6Q15654 476 aaKnown RBP12.62□□□□□ -0.39
CUX2-201ENST00000261726 PRICKLE4Q2TBC4 344 aa12.62□□□□□ -0.39
CUX2-201ENST00000261726 ZNF707Q96C28 371 aaPredicted RBP12.62□□□□□ -0.39
CUX2-201ENST00000261726 HAND1O96004 215 aa12.62□□□□□ -0.39
CUX2-201ENST00000261726 TMEM33P57088 247 aa12.62□□□□□ -0.39
CUX2-201ENST00000261726 OR4X1Q8NH49 305 aa12.62□□□□□ -0.39
CUX2-201ENST00000261726 Q8WTZ3 238 aa12.62□□□□□ -0.39
CUX2-201ENST00000261726 SAP30LQ9HAJ7 183 aa12.62□□□□□ -0.39
CUX2-201ENST00000261726 MFSD2BA6NFX1 497 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms