RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 SEC22AQ96IW7 307 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 OR4F4Q96R69 305 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 CLEC1BQ9P126 229 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 KLHL13Q9P2N7 655 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 NRXN2Q9P2S2 1712 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 SLX4Q8IY92 1834 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 ALPK3Q96L96 1907 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 F2RL2O00254 374 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 HYAL3O43820 417 aaPredicted RBP6.73□□□□□ -1.33
GPNMB-201ENST00000258733 CER1O95813 267 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 ATP1B1P05026 303 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 TPPP2P59282 170 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 NUMA1Q14980 2115 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 TCEAL5Q5H9L2 206 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 CDC20BQ86Y33 519 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 OR10G2Q8NGC3 310 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 LGALS14Q8TCE9 139 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 PP6455Q8WZ26 134 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 GPKOWQ92917 476 aaPredicted RBP eCLIP6.73□□□□□ -1.33
GPNMB-201ENST00000258733 NIPSNAP3BQ9BS92 247 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 PARLQ9H300 379 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 TXNIPQ9H3M7 391 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 IKZF5Q9H5V7 419 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 KLK11Q9UBX7 282 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 SHROOM3Q8TF72 1996 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 TMEM129A0AVI4 362 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 FAM220BPB1ANY3 271 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 M0R1X1 148 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 RAB27BO00194 218 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 EIF1AYO14602 144 aaKnown RBP6.73□□□□□ -1.33
GPNMB-201ENST00000258733 CD5LO43866 347 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 HLA-HP01893 362 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 SPINK8P0C7L1 97 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 ADRA1AP35348 466 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 LSSP48449 732 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 MGAT2Q10469 447 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 FAM69BQ5VUD6 431 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 PAQR9Q6ZVX9 377 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 TGIF2LYQ8IUE0 185 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 UMODL1-AS1Q8N2C9 162 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 OSR2Q8N2R0 312 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 LFNGQ8NES3 379 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 NEIL2Q969S2 332 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 ZC2HC1AQ96GY0 325 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 MYADMQ96S97 322 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 ABHD6Q9BV23 337 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 GP6Q9HCN6 339 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 HINT3Q9NQE9 182 aaKnown RBP6.73□□□□□ -1.33
GPNMB-201ENST00000258733 MCM3APO60318 1980 aa6.73□□□□□ -1.33
GPNMB-201ENST00000258733 DOCK1Q14185 1865 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 CENPVL1A0A0U1RR11 272 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 CENPVL3A0A0U1RRI6 287 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 PSMB11A5LHX3 300 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 A8MT66 165 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 M0R2Z0 102 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 TMPRSS2O15393 492 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 IGHG4P01861 327 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 HPNP05981 417 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 AKAIN1P0CW23 69 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 SNRPGP62308 76 aaKnown RBP6.72□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF92Q03936 586 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 PRSS53Q2L4Q9 553 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 SLC18B1Q6NT16 456 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 C8orf86Q6ZUL3 223 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.72□□□□□ -1.33
GPNMB-201ENST00000258733 TMEM123Q8N131 208 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 TMEM256Q8N2U0 113 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 SLC25A40Q8TBP6 338 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 DNAJC30Q96LL9 226 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 OXGR1Q96P68 337 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 RAB40CQ96S21 281 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 SCNM1Q9BWG6 230 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 ZDHHC11Q9H8X9 412 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 PATZ1Q9HBE1 687 aaKnown RBP6.72□□□□□ -1.33
GPNMB-201ENST00000258733 SIGLEC9Q9Y336 463 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 COL11A2P13942 1736 aaPredicted RBP6.72□□□□□ -1.33
GPNMB-201ENST00000258733 UBR3Q6ZT12 1888 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 A0A1B0GW64 132 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 GXYLT2A0PJZ3 443 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 ZAR1LA6NP61 321 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 J3QLI3 93 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 SMIM22K7EJ46 135 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 K7EP34 96 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 MLNRO43193 412 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 MSCO60682 206 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 OR2J3O76001 311 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 ISG15P05161 165 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 KLK2P20151 261 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 FAUP35544 74 aaKnown RBP6.72□□□□□ -1.33
GPNMB-201ENST00000258733 SRP14P37108 136 aaKnown RBP6.72□□□□□ -1.33
GPNMB-201ENST00000258733 OR1E2P47887 323 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 PGGT1BP53609 377 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 FOXG1P55316 489 aaPredicted RBP6.72□□□□□ -1.33
GPNMB-201ENST00000258733 GTF3C1Q12789 2109 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 MPV17L2Q567V2 206 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 FFAR4Q5NUL3 377 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF880Q6PDB4 577 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 FAM219AQ8IW50 185 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 OR4F5Q8NH21 305 aa6.72□□□□□ -1.33
GPNMB-201ENST00000258733 FCAMRQ8WWV6 532 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms