RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 ATF1P18846 271 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 PRKACBP22694 351 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 CDK2P24941 298 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 CD24P25063 80 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 FASP25445 335 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 POU3F4P49335 361 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 MTCP1P56278 107 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 PDZK1IP1Q13113 114 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 HLA-DRB5Q30154 266 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 TP53I3Q53FA7 332 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 UTF1Q5T230 341 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 PRAMEF5Q5TYX0 476 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 OR52W1Q6IF63 320 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 RTN4RL2Q86UN3 420 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 ABHD12Q8N2K0 398 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 OR10AC1Q8NH08 325 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 ZNF596Q8TC21 504 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 COQ2Q96H96 371 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 OPALINQ96PE5 141 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 GAL3ST2Q9H3Q3 398 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 ZNF286AQ9HBT8 521 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 TAS2R3Q9NYW6 316 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 ADAM30Q9UKF2 790 aa8.21□□□□□ -1.1
VPS50-201ENST00000251739 TRGV10A0A0A0MS01 117 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 A0A1W2PRX2 142 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 ODAMA1E959 279 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 CGB3P0DN86 165 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 CGB7P0DN87 165 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 CALCBP10092 127 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 BRS3P32247 399 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 GLIPR1P48060 266 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 CCR9P51686 369 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 EGFEM1PQ0D2K5 195 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 SLC25A30Q5SVS4 291 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 TMEM244Q5VVB8 128 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 Q6P435 159 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 C10orf99Q6UWK7 81 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 LHFPL2Q6ZUX7 228 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 FAM220AQ7Z4H9 259 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 AMIGO2Q86SJ2 522 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 SAXO1Q8IYX7 474 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 OR51A4Q8NGJ6 313 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 MYDGFQ969H8 173 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 AKR1E2Q96JD6 320 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 RBM14Q96PK6 669 aaKnown RBP8.2□□□□□ -1.1
VPS50-201ENST00000251739 SLC25A33Q9BSK2 321 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 ADI1Q9BV57 179 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 RHOFQ9HBH0 211 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 EXOSC4Q9NPD3 245 aaKnown RBP8.2□□□□□ -1.1
VPS50-201ENST00000251739 INPP5EQ9NRR6 644 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.2□□□□□ -1.1
VPS50-201ENST00000251739 GNG8Q9UK08 70 aa8.2□□□□□ -1.1
VPS50-201ENST00000251739 TSSC4Q9Y5U2 329 aaPredicted RBP8.2□□□□□ -1.1
VPS50-201ENST00000251739 FAM90A18PA6NE21 464 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 FAM90A16PA6NEW6 464 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 FAM90A20PA6NIJ5 464 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 OR4C45A6NMZ5 311 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 FAM90A9PA6NNJ1 464 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 FAM90A12PA8MX19 464 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 FAM90A5PA8MXJ8 464 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 LEUTXA8MZ59 168 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 OOSP1A8MZH6 123 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 BUB1B-PAK6H3BSN5 160 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 SLC33A1O00400 549 aaPredicted RBP8.19□□□□□ -1.1
VPS50-201ENST00000251739 SLC16A6O15403 523 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 CYB5AP00167 134 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 FAM90A15PP0C7V4 464 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 FAM90A13PP0C7W8 464 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 FAM90A14PP0C7W9 464 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 FAM90A24PP0C7X0 464 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 PF4V1P10720 104 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 FCGR1AP12314 374 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 SNU13P55769 128 aaKnown RBP8.19□□□□□ -1.1
VPS50-201ENST00000251739 KRTAP10-11P60412 298 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 ZP1P60852 638 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 SLC35A2P78381 396 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 AESQ08117 197 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 BNIP1Q12981 228 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 CDK5R1Q15078 307 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 C17orf58Q2M2W7 97 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 ABCA11PQ4W5N1 156 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 TPTE2P1Q5T6R2 138 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 ETV3LQ6ZN32 361 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 CCDC121Q6ZUS5 278 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 KCTD20Q7Z5Y7 419 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 TRAPPC6BQ86SZ2 158 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 MRPL41Q8IXM3 137 aaKnown RBP8.19□□□□□ -1.1
VPS50-201ENST00000251739 CHST4Q8NCG5 386 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 RFKQ969G6 155 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 FGGYQ96C11 551 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 PELI1Q96FA3 418 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 RCC1LQ96I51 464 aaKnown RBP8.19□□□□□ -1.1
VPS50-201ENST00000251739 KIRREL1Q96J84 757 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 OSBPL10Q9BXB5 764 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 LINC00574Q9H8X3 128 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 OAZ3Q9UMX2 235 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 GSTK1Q9Y2Q3 226 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 AP4S1Q9Y587 144 aa8.19□□□□□ -1.1
VPS50-201ENST00000251739 TCRBV4S1A1TA0A5B7 111 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 FUOMA2VDF0 154 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms