RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 PPP1CBP62140 327 aa21.5■■□□□ 1.03
TMEM55B-201ENST00000250489 NAAAQ02083 359 aa21.5■■□□□ 1.03
TMEM55B-201ENST00000250489 TSC22D1Q15714 1073 aa21.5■■□□□ 1.03
TMEM55B-201ENST00000250489 EIF4E3Q8N5X7 224 aaKnown RBP21.5■■□□□ 1.03
TMEM55B-201ENST00000250489 BVESQ8NE79 360 aa21.5■■□□□ 1.03
TMEM55B-201ENST00000250489 OR11L1Q8NGX0 322 aa21.5■■□□□ 1.03
TMEM55B-201ENST00000250489 LINC00052Q96N35 136 aa21.5■■□□□ 1.03
TMEM55B-201ENST00000250489 SYT3Q9BQG1 590 aa21.5■■□□□ 1.03
TMEM55B-201ENST00000250489 NARFLQ9H6Q4 476 aa21.5■■□□□ 1.03
TMEM55B-201ENST00000250489 SPACA1Q9HBV2 294 aa21.5■■□□□ 1.03
TMEM55B-201ENST00000250489 HSPB6O14558 160 aa21.49■■□□□ 1.03
TMEM55B-201ENST00000250489 CEACAM4O75871 244 aa21.49■■□□□ 1.03
TMEM55B-201ENST00000250489 IL13RA2Q14627 380 aa21.49■■□□□ 1.03
TMEM55B-201ENST00000250489 FAM58AQ8N1B3 248 aa21.49■■□□□ 1.03
TMEM55B-201ENST00000250489 C9orf106Q8NAJ2 232 aa21.49■■□□□ 1.03
TMEM55B-201ENST00000250489 NEK7Q8TDX7 302 aa21.49■■□□□ 1.03
TMEM55B-201ENST00000250489 SARAFQ96BY9 339 aa21.49■■□□□ 1.03
TMEM55B-201ENST00000250489 ZNF891A8MT65 544 aaPredicted RBP21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 KIR2DL2P43627 348 aaPredicted RBP21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 IGFBP7Q16270 282 aa21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 INO80CQ6PI98 192 aaPredicted RBP21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 LIAT1Q6ZQX7 453 aa21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 C5orf24Q7Z6I8 188 aa21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 CNEP1R1Q8N9A8 125 aa21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 CCDC71LQ8N9Z2 235 aa21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 SUMF2Q8NBJ7 301 aa21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 CCDC120Q96HB5 630 aa21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 OR2J1Q9GZK6 312 aa21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 J3QT63 122 aa21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 RHBDL1O75783 438 aa21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 CNOT4O95628 575 aaKnown RBP21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 SCTP09683 121 aa21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 FOXRED2Q8IWF2 684 aa21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 GTF3AQ92664 365 aaKnown RBP21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 C18orf12Q96KH6 178 aa21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 RTL8AQ9BWD3 113 aa21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 NUP50Q9UKX7 468 aa21.48■■□□□ 1.03
TMEM55B-201ENST00000250489 ERVS71-1P61550 626 aa21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 BAP18Q8IXM2 172 aa21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 C17orf78Q8N4C9 275 aa21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 WNT2BQ93097 391 aa21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 MSI2Q96DH6 328 aaKnown RBP21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 SLC5A7Q9GZV3 580 aa21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 KIR2DS1A0A191URI9 304 aa21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 TRDCB7Z8K6 153 aa21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 KIR2DS4P43632 304 aa21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 KIR2DS1Q14954 304 aa21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 HERPUD1Q15011 391 aa21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 VWA1Q6PCB0 445 aa21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 WDR86Q86TI4 376 aa21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 GLYATL2Q8WU03 294 aa21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 DNTTIP1Q9H147 329 aa21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 RIMS4Q9H426 269 aaPredicted RBP21.47■■□□□ 1.03
TMEM55B-201ENST00000250489 TRAV24A0A0B4J272 114 aa21.46■■□□□ 1.03
TMEM55B-201ENST00000250489 PRR33A8MZF0 331 aa21.46■■□□□ 1.03
TMEM55B-201ENST00000250489 SCO1O75880 301 aa21.46■■□□□ 1.03
TMEM55B-201ENST00000250489 DIRAS3O95661 229 aa21.46■■□□□ 1.03
TMEM55B-201ENST00000250489 TK1P04183 234 aa21.46■■□□□ 1.03
TMEM55B-201ENST00000250489 COX5AP20674 150 aa21.46■■□□□ 1.03
TMEM55B-201ENST00000250489 LYZL2Q7Z4W2 148 aa21.46■■□□□ 1.03
TMEM55B-201ENST00000250489 MRPL30Q8TCC3 161 aaKnown RBP21.46■■□□□ 1.03
TMEM55B-201ENST00000250489 ATP23Q9Y6H3 246 aa21.46■■□□□ 1.03
TMEM55B-201ENST00000250489 SHANK1Q9Y566 2161 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 C3orf80F5H4A9 247 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 H7C1Q1 480 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 LGALS8O00214 317 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 BET1O15155 118 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 DEDDO75618 318 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 HKR1P10072 659 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 GLI4P10075 376 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 HOXB1P14653 301 aaPredicted RBP21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 ZNF585AQ6P3V2 769 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 LGI3Q8N145 548 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 PRSS33Q8NF86 280 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 SLC25A40Q8TBP6 338 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 LRP5LA4QPB2 252 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 KRBOX1C9JBD0 128 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 GLAP06280 429 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 GNRHRP30968 328 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 KCNJ3P48549 501 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 FAM76BQ5HYJ3 339 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 FAM185AQ8N0U4 392 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 IFT22Q9H7X7 185 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 RHOFQ9HBH0 211 aa21.45■■□□□ 1.02
TMEM55B-201ENST00000250489 TRBV6-6A0A0A6YYG2 114 aa21.44■■□□□ 1.02
TMEM55B-201ENST00000250489 HS3ST1O14792 307 aa21.44■■□□□ 1.02
TMEM55B-201ENST00000250489 PHF1O43189 567 aaPredicted RBP21.44■■□□□ 1.02
TMEM55B-201ENST00000250489 SLC34A2O95436 690 aa21.44■■□□□ 1.02
TMEM55B-201ENST00000250489 RAC2P15153 192 aa21.44■■□□□ 1.02
TMEM55B-201ENST00000250489 CBR1P16152 277 aa21.44■■□□□ 1.02
TMEM55B-201ENST00000250489 SMCO1Q147U7 214 aa21.44■■□□□ 1.02
TMEM55B-201ENST00000250489 ACSF3Q4G176 576 aaPredicted RBP21.44■■□□□ 1.02
TMEM55B-201ENST00000250489 RDH5Q92781 318 aa21.44■■□□□ 1.02
TMEM55B-201ENST00000250489 BOD1Q96IK1 185 aa21.44■■□□□ 1.02
TMEM55B-201ENST00000250489 TAAR6Q96RI8 345 aa21.44■■□□□ 1.02
TMEM55B-201ENST00000250489 IGKV1-6A0A0C4DH72 117 aa21.43■■□□□ 1.02
TMEM55B-201ENST00000250489 MPPED1O15442 326 aa21.43■■□□□ 1.02
TMEM55B-201ENST00000250489 TUSC2O75896 110 aa21.43■■□□□ 1.02
TMEM55B-201ENST00000250489 UCP2P55851 309 aa21.43■■□□□ 1.02
TMEM55B-201ENST00000250489 ALKBH6Q3KRA9 238 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms