RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 A0A1W2PRV1 198 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 IL13RA2Q14627 380 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 FAM27BQ5VT28 67 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 CCDC54Q8NEL0 328 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 OR5L2Q8NGL0 311 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 OR11L1Q8NGX0 322 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 HLA-CQ95604 372 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 CRLF2Q9HC73 371 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 RPS10P5Q9NQ39 176 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 PLA2G3Q9NZ20 509 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 NSG1A0A0A6YYJ2 146 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 CLEC18AA5D8T8 446 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 FABP1P07148 127 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 TCN2P20062 427 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 FKBP2P26885 142 aaKnown RBP10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 FABP9Q0Z7S8 132 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 RHEBQ15382 184 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 EXT1Q16394 746 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 KRBOX4Q5JUW0 171 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 CLEC18CQ8NCF0 446 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 RTN4IP1Q8WWV3 396 aaPredicted RBP10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 DNASE2BQ8WZ79 361 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 RARRES2Q99969 163 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 NECAP2Q9NVZ3 263 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 OR6C6A6NF89 314 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 C9J4A7 227 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 M0R135 149 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 HTR5AP47898 357 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 RSU1Q15404 277 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 ZNF295-AS1Q8N0V1 137 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 CD300LFQ8TDQ1 290 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 ZNF799Q96GE5 643 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 SUCNR1Q9BXA5 334 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 OR51M1Q9H341 326 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 ZNF442Q9H7R0 627 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 SPACA1Q9HBV2 294 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 DOCK11Q5JSL3 2073 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 LOC102723996A0A087X1L8 192 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 GEMIN2O14893 280 aaKnown RBP10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 PCOLCEQ15113 449 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 PIGYQ3MUY2 71 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 SPATA46Q5T0L3 261 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 SPSB1Q96BD6 273 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 MUCL1Q96DR8 90 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 ABHD14AQ9BUJ0 271 aa10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 ZMAT5Q9UDW3 170 aaKnown RBP10.32□□□□□ -0.76
SEC61A1-201ENST00000243253 PHOX2AO14813 284 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 ZNF16P17020 682 aaPredicted RBP10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 RAB5CP51148 216 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 SLC23A3Q6PIS1 610 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 Q6ZS49 121 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 ZNF100Q8IYN0 542 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 FBXL14Q8N1E6 418 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 SLC35B3Q9H1N7 401 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 CALHM2Q9HA72 323 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 A0A1W2PPE2 198 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 C1orf196B1AJZ1 125 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 PROB1E7EW31 1015 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 TSPAN15O95858 294 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 ARG1P05089 322 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 EPHA1P21709 976 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 GDF1P27539 372 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 B3GALT5-AS1P59052 145 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 RNPS1Q15287 305 aaKnown RBP10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 HAGHQ16775 308 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 SPINK14Q6IE38 97 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 HSD17B11Q8NBQ5 300 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 SIGLEC12Q96PQ1 595 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 HES7Q9BYE0 225 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 SRXN1Q9BYN0 137 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 C12orf49Q9H741 205 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 TNRC18O15417 2968 aaPredicted RBP10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 HSD17B6O14756 317 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 TMEM50AO95807 157 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 GLP1RP43220 463 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 RGS19P49795 217 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 MRPS34P82930 218 aaKnown RBP10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 ABCA11PQ4W5N1 156 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 FAM24BQ8N5W8 94 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 SLC35G3Q8N808 338 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 OR8G5Q8NG78 346 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 ABHD3Q8WU67 409 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 TMEM56Q96MV1 263 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 PLSCR2Q9NRY7 297 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 FAM86C1Q9NVL1 165 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 STRAPQ9Y3F4 350 aaKnown RBP10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 TMEM56-RWDD3S4R434 201 aa10.31□□□□□ -0.76
SEC61A1-201ENST00000243253 HEATR1Q9H583 2144 aaKnown RBP10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 IGSF23A1L1A6 192 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 TP53I11O14683 189 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 DHHO43323 396 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 SNRNP70P08621 437 aaKnown RBP10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 ZNF728P0DKX0 622 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 GNRHRP30968 328 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 HIKESHIQ53FT3 197 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 ACER2Q5QJU3 275 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 RPS19BP1Q86WX3 136 aaKnown RBP10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 IL1F10Q8WWZ1 152 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 FGF23Q9GZV9 251 aaPredicted RBP10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 MAGT1Q9H0U3 335 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms