RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ETAA1Q9NY74 926 aa11.2□□□□□ -0.62
SLIRP-201ENST00000238688 MTCH1Q9NZJ7 389 aa11.2□□□□□ -0.62
SLIRP-201ENST00000238688 ZDHHC8Q9ULC8 765 aa11.2□□□□□ -0.62
SLIRP-201ENST00000238688 NAV3Q8IVL0 2385 aa11.2□□□□□ -0.62
SLIRP-201ENST00000238688 CADP27708 2225 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 TRAV6A0A075B6T7 132 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 KIR2DS1A0A191URI9 304 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 MCRIP1C9JLW8 97 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 GEMIN2O14893 280 aaKnown RBP11.19□□□□□ -0.62
SLIRP-201ENST00000238688 ARPC1BO15143 372 aaKnown RBP11.19□□□□□ -0.62
SLIRP-201ENST00000238688 SIAH2O43255 324 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 OR7C1O76099 320 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-201ENST00000238688 PLATP00750 562 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 ADH4P08319 380 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 CTXN2P0C2S0 81 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 ZNF735P0CB33 412 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 BCL3P20749 454 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 HRH1P35367 487 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 KIR2DS4P43632 304 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 GATA4P43694 442 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 SNU13P55769 128 aaKnown RBP11.19□□□□□ -0.62
SLIRP-201ENST00000238688 FAM27E3Q08E93 113 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 ZNF154Q13106 437 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 KIR2DS1Q14954 304 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 CHRFAM7AQ494W8 412 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 TMEM255AQ5JRV8 349 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 FAM209AQ5JX71 171 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 C22orf34Q6ZV56 151 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 SPICQ8N5J4 248 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 POC1AQ8NBT0 407 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 SCCPDHQ8NBX0 429 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 TERB2Q8NHR7 220 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 TMEM171Q8WVE6 324 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 GIMAP1Q8WWP7 306 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 SLAMF9Q96A28 289 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 FGF23Q9GZV9 251 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-201ENST00000238688 OR51B6Q9H340 312 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 ZNF286AQ9HBT8 521 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 HES4Q9HCC6 221 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 NDRG3Q9UGV2 375 aa11.19□□□□□ -0.62
SLIRP-201ENST00000238688 FBXO9Q9UK97 447 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-201ENST00000238688 A0A0A6YYJ9 748 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 TMEM82A0PJX8 343 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 IFNL4K9M1U5 179 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 TNFSF4P23510 183 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 MPV17P39210 176 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 PRSS12P56730 875 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 SEC61A1P61619 476 aaKnown RBP11.18□□□□□ -0.62
SLIRP-201ENST00000238688 PAX5Q02548 391 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 MAB21L1Q13394 359 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 SMIM21Q3B7S5 101 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 PIGYQ3MUY2 71 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 NKAPLQ5M9Q1 402 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 C11orf88Q6PI97 169 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 OVCH2Q7RTZ1 564 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 C6orf201Q7Z4U5 140 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 C1QTNF6Q9BXI9 259 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 ESRP2Q9H6T0 727 aaKnown RBP11.18□□□□□ -0.62
SLIRP-201ENST00000238688 NECAP2Q9NVZ3 263 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 ANXA10Q9UJ72 324 aa11.18□□□□□ -0.62
SLIRP-201ENST00000238688 SH2D1BO14796 132 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 LILRA1O75019 489 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 NAPSAO96009 420 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 FCGR3AP08637 254 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 PRKACAP17612 351 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 NPBWR2P48146 333 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 ARPC4P59998 168 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 ERVS71-1P61550 626 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 MPPED2Q15777 294 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 MICBQ29980 383 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 ZNF626Q68DY1 528 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 LPCAT3Q6P1A2 487 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 LHFPL1Q86WI0 220 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 MRPL24Q96A35 216 aaKnown RBP11.17□□□□□ -0.62
SLIRP-201ENST00000238688 MBD6Q96DN6 1003 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 WFIKKN1Q96NZ8 548 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 SLC6A7Q99884 636 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 TINAGL1Q9GZM7 467 aaPredicted RBP11.17□□□□□ -0.62
SLIRP-201ENST00000238688 PPA2Q9H2U2 334 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 DECR2Q9NUI1 292 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 SLC23A1Q9UHI7 598 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 AK3Q9UIJ7 227 aa11.17□□□□□ -0.62
SLIRP-201ENST00000238688 CHD3Q12873 2000 aaKnown RBP11.17□□□□□ -0.62
SLIRP-201ENST00000238688 PIGBOS1A0A0B4J2F0 54 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 MEIS3P1A6NDR6 274 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 DEFB108AA8MXU0 73 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 M0QYG6 137 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 MLNRO43193 412 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 SYNGR1O43759 233 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 NXPH2O95156 264 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 GOSR1O95249 250 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 KNG1P01042 644 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 RLN1P04808 185 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 SULT1A3P0DMM9 295 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 SULT1A4P0DMN0 295 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 ANXA3P12429 323 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 FPR2P25090 351 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 LMO1P25800 156 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 LOXP28300 417 aaPredicted RBP11.16□□□□□ -0.62
SLIRP-201ENST00000238688 FABP6P51161 128 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms