RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 KPTNQ9Y664 436 aa16.17■□□□□ 0.18
CLIP2-201ENST00000223398 KCNMB2Q9Y691 235 aa16.17■□□□□ 0.18
CLIP2-201ENST00000223398 TDRD6O60522 2096 aaKnown RBP16.16■□□□□ 0.18
CLIP2-201ENST00000223398 ARFGEF1Q9Y6D6 1849 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 PPIAL4EA0A075B759 164 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 PRR33A8MZF0 331 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 PPIAL4DF5H284 164 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 PPIAL4FP0DN26 164 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 COX6A1P12074 109 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 KIR2DS2P43631 304 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 FFAR4Q5NUL3 377 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 PPIAL4AQ9Y536 164 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 NPTNQ9Y639 398 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 ZNF260Q3ZCT1 412 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 DMKNQ6E0U4 476 aaPredicted RBP16.16■□□□□ 0.18
CLIP2-201ENST00000223398 FAM122BQ7Z309 247 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 TGIF2LYQ8IUE0 185 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 TGIF2LXQ8IUE1 241 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 FKBP11Q9NYL4 201 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 CISD1Q9NZ45 108 aaKnown RBP16.16■□□□□ 0.18
CLIP2-201ENST00000223398 PPP5D1E7EU14 171 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 GYPAP02724 150 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 METTL15P1P0C7V9 234 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 H3F3AP84243 136 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 ABHD14AQ9BUJ0 271 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 GSX2Q9BZM3 304 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 NAA60Q9H7X0 242 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 TRDCB7Z8K6 153 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 TSPAN2O60636 221 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 OR2J3O76001 311 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 ETFRF1Q6IPR1 90 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 CCDC190Q86UF4 302 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 SLC26A10Q8NG04 563 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 MS4A7Q9GZW8 240 aaPredicted RBP16.16■□□□□ 0.18
CLIP2-201ENST00000223398 LRRC37AA6NMS7 1700 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 TRBV5-3A0A0A0MS03 114 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 AHRRA9YTQ3 701 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 TPRX1Q8N7U7 411 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 OR13D1Q8NGV5 346 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 OR4S2Q8NH73 311 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 RSRP1Q9BUV0 290 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 SLC25A10Q9UBX3 287 aaPredicted RBP16.16■□□□□ 0.18
CLIP2-201ENST00000223398 TMED3Q9Y3Q3 217 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 LIPGQ9Y5X9 500 aa16.16■□□□□ 0.18
CLIP2-201ENST00000223398 ZNFX1Q9P2E3 1918 aaKnown RBP16.16■□□□□ 0.18
CLIP2-201ENST00000223398 NTF3P20783 257 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 OR2B8PP59922 312 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 GLDNQ6ZMI3 551 aaPredicted RBP16.15■□□□□ 0.18
CLIP2-201ENST00000223398 TMEM105Q8N8V8 129 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 GPA33Q99795 319 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 STARD10Q9Y365 291 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 A1L4Q6 167 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 DNPH1O43598 174 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 OR2C1O95371 312 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 IGHA1P01876 353 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 NSUN5P2Q63ZY6 315 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 MED19A0JLT2 244 aaPredicted RBP16.15■□□□□ 0.18
CLIP2-201ENST00000223398 C4orf51C9J302 202 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 NDUFB6O95139 128 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 SFT2D2O95562 160 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 ASCL5Q7RTU5 278 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 SPICQ8N5J4 248 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 ZDHHC22Q8N966 263 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 OR52L2PQ8NGH6 319 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 RNF133Q8WVZ7 376 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 R3HDM4Q96D70 268 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 GRAMD2BQ96HH9 432 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 RP1P56715 2156 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 FAM24AA6NFZ4 105 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 PSG4Q00888 419 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 CCL13Q99616 98 aa16.15■□□□□ 0.18
CLIP2-201ENST00000223398 TRAPPC2P0DI81 140 aa16.14■□□□□ 0.17
CLIP2-201ENST00000223398 TRAPPC2BP0DI82 140 aa16.14■□□□□ 0.17
CLIP2-201ENST00000223398 FAM3AP98173 230 aa16.14■□□□□ 0.17
CLIP2-201ENST00000223398 GGNBP1Q5YKI7 109 aa16.14■□□□□ 0.17
CLIP2-201ENST00000223398 OR1L4Q8NGR5 311 aa16.14■□□□□ 0.17
CLIP2-201ENST00000223398 FBP1P09467 338 aa16.14■□□□□ 0.17
CLIP2-201ENST00000223398 DHRS2Q13268 280 aa16.14■□□□□ 0.17
CLIP2-201ENST00000223398 ECSCRQ19T08 205 aa16.14■□□□□ 0.17
CLIP2-201ENST00000223398 PDZD11Q5EBL8 140 aa16.14■□□□□ 0.17
CLIP2-201ENST00000223398 ZNRF4Q8WWF5 429 aa16.14■□□□□ 0.17
CLIP2-201ENST00000223398 FDCSPQ8NFU4 85 aa16.14■□□□□ 0.17
CLIP2-201ENST00000223398 NEIL1Q96FI4 390 aaPredicted RBP16.14■□□□□ 0.17
CLIP2-201ENST00000223398 ZNF629Q9UEG4 869 aaPredicted RBP16.14■□□□□ 0.17
CLIP2-201ENST00000223398 SLC25A5P05141 298 aaKnown RBP16.14■□□□□ 0.17
CLIP2-201ENST00000223398 UCP2P55851 309 aa16.14■□□□□ 0.17
CLIP2-201ENST00000223398 TBC1D26Q86UD7 250 aa16.14■□□□□ 0.17
CLIP2-201ENST00000223398 BCL2L2Q92843 193 aaPredicted RBP16.14■□□□□ 0.17
CLIP2-201ENST00000223398 CTDSP1Q9GZU7 261 aa16.14■□□□□ 0.17
CLIP2-201ENST00000223398 ERGP11308 486 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 ZBTB37Q5TC79 503 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 OR5C1Q8NGR4 320 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 SLIRPQ9GZT3 109 aaKnown RBP16.13■□□□□ 0.17
CLIP2-201ENST00000223398 FAM87AP0C7U9 286 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 RPL31P62899 125 aaKnown RBP16.13■□□□□ 0.17
CLIP2-201ENST00000223398 COL10A1Q03692 680 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 FAM103A1Q9BTL3 118 aaKnown RBP16.13■□□□□ 0.17
CLIP2-201ENST00000223398 MUC20Q8N307 709 aaPredicted RBP16.13■□□□□ 0.17
CLIP2-201ENST00000223398 FAM181AQ8N9Y4 354 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 OR5A2Q8NGI9 324 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms