RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ZMIZ1Q9ULJ6 1067 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 CYTIPO60759 359 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 RAB7AP51149 207 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 IL13RA2Q14627 380 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 PLAC9Q5JTB6 97 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 OR5D13Q8NGL4 314 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 RPEQ96AT9 228 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 MOB3AQ96BX8 217 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 ZNF320A2RRD8 509 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 CDIPTO14735 213 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 GEMIN2O14893 280 aaKnown RBP10.12□□□□□ -0.79
NOD1-201ENST00000222823 FCARP24071 287 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 MPGP29372 298 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 MLF1P58340 268 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 RPL7L1Q6DKI1 246 aaKnown RBP10.12□□□□□ -0.79
NOD1-201ENST00000222823 ETV3LQ6ZN32 361 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 FAM181AQ8N9Y4 354 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 GPR137Q96N19 417 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 CXXC4Q9H2H0 198 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 MRPL22Q9NWU5 206 aaKnown RBP10.12□□□□□ -0.79
NOD1-201ENST00000222823 OR6C3Q9NZP0 311 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 ESPL1Q14674 2120 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 FAM90A27PA6NNH2 459 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 HPXP02790 462 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 VSIG8P0DPA2 414 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 CXCL3P19876 107 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 TMEM267Q0VDI3 215 aaPredicted RBP10.12□□□□□ -0.79
NOD1-201ENST00000222823 MGAT2Q10469 447 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.12□□□□□ -0.79
NOD1-201ENST00000222823 PMS2CLQ68D20 193 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 OR2T6Q8NHC8 308 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 ZNF385AQ96PM9 386 aaKnown RBP10.12□□□□□ -0.79
NOD1-201ENST00000222823 LRFN3Q9BTN0 628 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 SLC26A1Q9H2B4 701 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 GPR35Q9HC97 309 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 SLC35D1Q9NTN3 355 aa10.12□□□□□ -0.79
NOD1-201ENST00000222823 RECKO95980 971 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 IGHV3-13P01766 116 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 IGHV3-7P01780 117 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 MNX1P50219 401 aaPredicted RBP10.11□□□□□ -0.79
NOD1-201ENST00000222823 POLR2GP62487 172 aaKnown RBP eCLIP10.11□□□□□ -0.79
NOD1-201ENST00000222823 ZNF528Q3MIS6 628 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 CLEC18BQ6UXF7 455 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 OR10AD1Q8NGE0 317 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 RPS4Y2Q8TD47 263 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 FAM117AQ9C073 453 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 NARFLQ9H6Q4 476 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 TINAGQ9UJW2 476 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 TDRD6O60522 2096 aaKnown RBP10.11□□□□□ -0.79
NOD1-201ENST00000222823 PNPP00491 289 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 CNN1P51911 297 aaKnown RBP10.11□□□□□ -0.79
NOD1-201ENST00000222823 TSPO2Q5TGU0 170 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 ZPLD1Q8TCW7 415 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 PHYHIPLQ96FC7 376 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 OR2H1Q9GZK4 316 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 SIRT4Q9Y6E7 314 aaPredicted RBP10.11□□□□□ -0.79
NOD1-201ENST00000222823 CACNA1DQ01668 2161 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 ROS1P08922 2347 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 SPAARA0A1B0GVQ0 90 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 XKRY2A2RUG3 117 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 NCBP2LA6PVI3 153 aaKnown RBP10.11□□□□□ -0.79
NOD1-201ENST00000222823 IFI6P09912 130 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 SFTA3P0C7M3 94 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 TMEM33P57088 247 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 CHRDL1Q9BU40 450 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 GAL3ST2Q9H3Q3 398 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 TMEM38BQ9NVV0 291 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 VDAC1P21796 283 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 FFAR4Q5NUL3 377 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 LIAT1Q6ZQX7 453 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 ZNF429Q86V71 674 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 OR6S1Q8NH40 331 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 SCARF2Q96GP6 870 aaPredicted RBP10.11□□□□□ -0.79
NOD1-201ENST00000222823 DHRS9Q9BPW9 319 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 TGIF2Q9GZN2 237 aa10.11□□□□□ -0.79
NOD1-201ENST00000222823 A0A0J9YW62 118 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 DBX1A6NMT0 343 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 PPIHO43447 177 aaKnown RBP10.1□□□□□ -0.79
NOD1-201ENST00000222823 DXOO77932 396 aaKnown RBP10.1□□□□□ -0.79
NOD1-201ENST00000222823 CRHP06850 196 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 CSF2RBP32927 897 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 NANOS3P60323 173 aaKnown RBP10.1□□□□□ -0.79
NOD1-201ENST00000222823 ZDHHC11Q9H8X9 412 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 MMP26Q9NRE1 261 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 ABCA1O95477 2261 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 MAP1LC3B2A6NCE7 125 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 NGFRP08138 427 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 ASAH2BP0C7U1 165 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 SMIM10L1P0DMW3 83 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 ADAT3Q96EY9 351 aaPredicted RBP10.1□□□□□ -0.79
NOD1-201ENST00000222823 SMIM10Q96HG1 83 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 MAP1LC3BQ9GZQ8 125 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 ST6GALNAC2Q9UJ37 374 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 DOCK6Q96HP0 2047 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 J3QT63 122 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 SOX15O60248 233 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 PLPPR5Q32ZL2 321 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 TMEM211Q6ICI0 200 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 CLRN3Q8NCR9 226 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 OR2M7Q8NG81 312 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms