RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ZNF573Q86YE8 665 aa12.96□□□□□ -0.34
UBE2D4-201ENST00000222402 ICE1Q9Y2F5 2266 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 LINC01387J3KSC0 135 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 MPPED1O15442 326 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 ADAM20O43506 726 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 WDR1O75083 606 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 DEDDO75618 318 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 MBPP02686 304 aaPredicted RBP12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 GUK1Q16774 197 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 SLC35G3Q8N808 338 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 UMAD1C9J7I0 102 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 CTXN2P0C2S0 81 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 CA6P23280 308 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 FOXD3Q9UJU5 478 aaPredicted RBP12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 HSF4Q9ULV5 492 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 AMDHD2Q9Y303 409 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 NHLH2Q02577 135 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 RIPPLY2Q5TAB7 128 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 TBC1D26Q86UD7 250 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 LHFPL1Q86WI0 220 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 OR2C3Q8N628 320 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 SFT2D1Q8WV19 159 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 ZNF488Q96MN9 340 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 NRIP2Q9BQI9 281 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 ZNF581Q9P0T4 197 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 PPP1R3CQ9UQK1 317 aa12.95□□□□□ -0.34
UBE2D4-201ENST00000222402 NKX2-6A6NCS4 301 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 TUSC2O75896 110 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 NFYBP25208 207 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 DVL1P1P54792 670 aaPredicted RBP12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 CALHM1Q8IU99 346 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 FGFBP3Q8TAT2 258 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 C19orf12Q9NSK7 152 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 PURGQ9UJV8 347 aaKnown RBP12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 RIF1Q5UIP0 2472 aaKnown RBP12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 CA11O75493 328 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 C1QL1O75973 258 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 NPBWR1P48145 328 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 HMGN3Q15651 99 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 GPR157Q5UAW9 335 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 TMEM211Q6ICI0 200 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 LYPD6Q86Y78 171 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 FAM185AQ8N0U4 392 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 GAPTQ8N292 157 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 SEC11CQ9BY50 192 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 UNKLQ9H9P5 680 aaKnown RBP12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 LHX6Q9UPM6 363 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 CELA3AP09093 270 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 MEOX1P50221 254 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 ZFP36L1Q07352 338 aaKnown RBP12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 EIF3IQ13347 325 aaKnown RBP12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 CDCP2Q5VXM1 449 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 LDLRAD3Q86YD5 345 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 ADAMTS17Q8TE56 1095 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 DEPPQ9NTK1 212 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 PRELID3BQ9Y3B1 194 aa12.94□□□□□ -0.34
UBE2D4-201ENST00000222402 IL2RGP31785 369 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 GNG3P63215 75 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 IL13RA2Q14627 380 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 HAGHQ16775 308 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 TBC1D28Q2M2D7 210 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 ADAM5Q6NVV9 412 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 C17orf78Q8N4C9 275 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 OR8U1Q8NH10 309 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 ERRFI1Q9UJM3 462 aaPredicted RBP12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 TTC28Q96AY4 2481 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 TRAV39A0A0B4J263 110 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 DBX1A6NMT0 343 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 H2AFB1P0C5Y9 115 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 RAC2P15153 192 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 SRSF3P84103 164 aaKnown RBP12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 ERGIC1Q969X5 290 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 hCG_38984A0A1B0GV85 526 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 SULT1A2P50226 295 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 SRSF4Q08170 494 aaKnown RBP12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 RHEBQ15382 184 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 SHEQ5VZ18 495 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 TIPARPQ7Z3E1 657 aaKnown RBP12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 OR52M1Q8NGK5 317 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 CCL28Q9NRJ3 127 aa12.93□□□□□ -0.34
UBE2D4-201ENST00000222402 ZNF716A6NP11 495 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 TRIM77I1YAP6 450 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 ESPL1Q14674 2120 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 HIKESHIQ53FT3 197 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 DCAF10Q5QP82 559 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 GCNT2Q8N0V5 402 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 OR5C1Q8NGR4 320 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 STRAPQ9Y3F4 350 aaKnown RBP12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 SLC22A20A6NK97 555 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 NTN3O00634 580 aaPredicted RBP12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 SCTP09683 121 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 CRYGSP22914 178 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 ALDH3B1P43353 468 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 FAM58AQ8N1B3 248 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 IGKV1-27A0A075B6S5 117 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 PIGBOS1A0A0B4J2F0 54 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 DNASE2O00115 360 aaPredicted RBP12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 CYTIPO60759 359 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 MT-CO3P00414 261 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms