RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 NKX2-6A6NCS4 301 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 C17orf51A8MQB3 221 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 GALR2O43603 387 aaPredicted RBP12.82□□□□□ -0.36
PTPRA-201ENST00000216877 BCL2P10415 239 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 AGBL4Q5VU57 503 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 FAM90A2PQ658T7 463 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 KIR2DL5AQ8N109 375 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 MFSD9Q8NBP5 474 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 OR4F5Q8NH21 305 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 RLN3Q8WXF3 142 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 GNPNAT1Q96EK6 184 aaPredicted RBP12.82□□□□□ -0.36
PTPRA-201ENST00000216877 OR4F4Q96R69 305 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 MANBALQ9NQG1 85 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 POU2F2P09086 479 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 ADH5P11766 374 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 CDKN1AP38936 164 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 CXorf66Q5JRM2 361 aaPredicted RBP12.82□□□□□ -0.36
PTPRA-201ENST00000216877 WBP2NLQ6ICG8 309 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 BATF2Q8N1L9 274 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 TMEM170AQ8WVE7 144 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 ARRDC3Q96B67 414 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 SLC2A9Q9NRM0 540 aa12.82□□□□□ -0.36
PTPRA-201ENST00000216877 LOC102723971A0A1B0GUV8 181 aa12.81□□□□□ -0.36
PTPRA-201ENST00000216877 PRNPP04156 253 aa12.81□□□□□ -0.36
PTPRA-201ENST00000216877 HERV-K104P61576 105 aa12.81□□□□□ -0.36
PTPRA-201ENST00000216877 ZNF117Q03924 483 aa12.81□□□□□ -0.36
PTPRA-201ENST00000216877 LHX4Q969G2 390 aa12.81□□□□□ -0.36
PTPRA-201ENST00000216877 TNFSF13O75888 250 aa12.81□□□□□ -0.36
PTPRA-201ENST00000216877 RANP62826 216 aaKnown RBP12.81□□□□□ -0.36
PTPRA-201ENST00000216877 DEFB110Q30KQ9 67 aa12.81□□□□□ -0.36
PTPRA-201ENST00000216877 KCNIP4Q6PIL6 250 aa12.81□□□□□ -0.36
PTPRA-201ENST00000216877 TCF23Q7RTU1 214 aa12.81□□□□□ -0.36
PTPRA-201ENST00000216877 TMEM252Q8N6L7 170 aa12.81□□□□□ -0.36
PTPRA-201ENST00000216877 TMEM171Q8WVE6 324 aa12.81□□□□□ -0.36
PTPRA-201ENST00000216877 ANGPTL4Q9BY76 406 aa12.81□□□□□ -0.36
PTPRA-201ENST00000216877 TUBD1Q9UJT1 453 aa12.81□□□□□ -0.36
PTPRA-201ENST00000216877 NPIPA2E9PIF3 369 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 GPR3P46089 330 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 RND2P52198 227 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 TPPP2P59282 170 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 ELAVL3Q14576 367 aaKnown RBP12.8□□□□□ -0.36
PTPRA-201ENST00000216877 IL13RA2Q14627 380 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 PDCD1Q15116 288 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 UEVLDQ8IX04 471 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 STARD4Q96DR4 205 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 CLDN17P56750 224 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 RPS18P62269 152 aaKnown RBP12.8□□□□□ -0.36
PTPRA-201ENST00000216877 SELENOTP62341 195 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 TMEM267Q0VDI3 215 aaPredicted RBP12.8□□□□□ -0.36
PTPRA-201ENST00000216877 SPATA45Q537H7 98 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 RIPPLY2Q5TAB7 128 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 TCEAL8Q8IYN2 117 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 FAM3CQ92520 227 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 CTDSP1Q9GZU7 261 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 RBKSQ9H477 322 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 SLC39A9Q9NUM3 307 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 TMEM106BQ9NUM4 274 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 IFNA1P01562 189 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 PNMTP11086 282 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 CEBPBP17676 345 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 IL12BP29460 328 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 DEFB119Q8N690 84 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 PIGTQ969N2 578 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 PTX4Q96A99 478 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 EMC6Q9BV81 110 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 PLEKHF2Q9H8W4 249 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 RPRMQ9NS64 109 aa12.8□□□□□ -0.36
PTPRA-201ENST00000216877 BOD1Q96IK1 185 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 IMMP2LQ96T52 175 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 NUDT22Q9BRQ3 303 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 NAA60Q9H7X0 242 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 ZNF286AQ9HBT8 521 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 NAT8Q9UHE5 227 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 FSTP19883 344 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 PMCHP20382 165 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 CD226Q15762 336 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 MRPL43Q8N983 215 aaKnown RBP12.79□□□□□ -0.36
PTPRA-201ENST00000216877 PBOV1Q9GZY1 135 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 LAMTOR2Q9Y2Q5 125 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 PHF3Q92576 2039 aaKnown RBP12.79□□□□□ -0.36
PTPRA-201ENST00000216877 EGR1P18146 543 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 UBE2V1Q13404 147 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 PRICKLE4Q2TBC4 344 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 C16orf54Q6UWD8 224 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 ERN2Q76MJ5 926 aaKnown RBP12.79□□□□□ -0.36
PTPRA-201ENST00000216877 KLHDC3Q9BQ90 382 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 WWTR1Q9GZV5 400 aa12.79□□□□□ -0.36
PTPRA-201ENST00000216877 ZNF816-ZNF321PA0A0X1KG74 233 aa12.78□□□□□ -0.36
PTPRA-201ENST00000216877 CIDEAO60543 219 aa12.78□□□□□ -0.36
PTPRA-201ENST00000216877 CTSVO60911 334 aa12.78□□□□□ -0.36
PTPRA-201ENST00000216877 ZNF737O75373 536 aa12.78□□□□□ -0.36
PTPRA-201ENST00000216877 APODP05090 189 aa12.78□□□□□ -0.36
PTPRA-201ENST00000216877 DUSP3P51452 185 aaPredicted RBP12.78□□□□□ -0.36
PTPRA-201ENST00000216877 OR51G1Q8NGK1 321 aa12.78□□□□□ -0.36
PTPRA-201ENST00000216877 LIN37Q96GY3 246 aaPredicted RBP12.78□□□□□ -0.36
PTPRA-201ENST00000216877 LINC00615Q96LM1 132 aaPredicted RBP12.78□□□□□ -0.36
PTPRA-201ENST00000216877 WNT10AQ9GZT5 417 aa12.78□□□□□ -0.36
PTPRA-201ENST00000216877 TBX21Q9UL17 535 aa12.78□□□□□ -0.36
PTPRA-201ENST00000216877 HRASP01112 189 aa12.78□□□□□ -0.36
PTPRA-201ENST00000216877 RPL27P61353 136 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms