RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 ARPC5O15511 151 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 IFNA2P01563 188 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 CTXN2P0C2S0 81 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 PGA5P0DJD9 388 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 ZNF44P15621 663 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 BMP5P22003 454 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 MDH2P40926 338 aaKnown RBP14.8□□□□□ -0.04
VRK1-201ENST00000216639 ERVK11-1P61568 191 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 HERV-K104P61576 105 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 ABCA11PQ4W5N1 156 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 MRGPRGQ86SM5 289 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 USB1Q9BQ65 265 aaKnown RBP14.8□□□□□ -0.04
VRK1-201ENST00000216639 NRIP2Q9BQI9 281 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 TEX13DA0A0J9YY54 714 aaPredicted RBP14.79□□□□□ -0.04
VRK1-201ENST00000216639 POM121CA8CG34 1229 aa14.79□□□□□ -0.04
VRK1-201ENST00000216639 H0YL77 283 aa14.79□□□□□ -0.04
VRK1-201ENST00000216639 H7C1Q1 480 aa14.79□□□□□ -0.04
VRK1-201ENST00000216639 HS3ST1O14792 307 aa14.79□□□□□ -0.04
VRK1-201ENST00000216639 NXPH2O95156 264 aa14.79□□□□□ -0.04
VRK1-201ENST00000216639 RBMXP38159 391 aaKnown RBP14.79□□□□□ -0.04
VRK1-201ENST00000216639 UCP3P55916 312 aa14.79□□□□□ -0.04
VRK1-201ENST00000216639 SUPT4H1P63272 117 aaKnown RBP14.79□□□□□ -0.04
VRK1-201ENST00000216639 OPCMLQ14982 345 aa14.79□□□□□ -0.04
VRK1-201ENST00000216639 SPIN3Q5JUX0 258 aa14.79□□□□□ -0.04
VRK1-201ENST00000216639 TEX261Q6UWH6 196 aa14.79□□□□□ -0.04
VRK1-201ENST00000216639 RDH5Q92781 318 aa14.79□□□□□ -0.04
VRK1-201ENST00000216639 TOMM40LQ969M1 308 aa14.79□□□□□ -0.04
VRK1-201ENST00000216639 PIK3IP1Q96FE7 263 aa14.79□□□□□ -0.04
VRK1-201ENST00000216639 U3KQ87 197 aa14.79□□□□□ -0.04
VRK1-201ENST00000216639 INTS1Q8N201 2190 aaKnown RBP14.78□□□□□ -0.04
VRK1-201ENST00000216639 TRBV6-6A0A0A6YYG2 114 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 TRDCB7Z8K6 153 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 SH2D1BO14796 132 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 MLNRO43193 412 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 DIRAS3O95661 229 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 TK1P04183 234 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 CXCL2P19875 107 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 ALKBH2Q6NS38 261 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 SLC38A6Q8IZM9 456 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 MOB3AQ96BX8 217 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 SNRNP40Q96DI7 357 aaKnown RBP14.78□□□□□ -0.04
VRK1-201ENST00000216639 SEC22AQ96IW7 307 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 ELOVL5Q9NYP7 299 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 GLS2Q9UI32 602 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 ZNF835Q9Y2P0 537 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 KCNIP3Q9Y2W7 256 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 ATP23Q9Y6H3 246 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 TRAV24A0A0B4J272 114 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 C13orf42A0A1B0GVH6 325 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 CRYM-AS1A6NIL9 109 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 IFNA7P01567 189 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 FAM87AP0C7U9 286 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 RPS2P15880 293 aaKnown RBP14.78□□□□□ -0.04
VRK1-201ENST00000216639 SERPINF1P36955 418 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 FXYD4P59646 89 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 IGFBP7Q16270 282 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 Q6ZPA2 131 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 SLC7A5P1Q8MH63 180 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 POC1AQ8NBT0 407 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 OR5T2Q8NGG2 359 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 NMES1Q9C002 83 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 LIME1Q9H400 295 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 HEXA-AS1Q9H8Q6 139 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 C1orf123Q9NWV4 160 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 TREM2Q9NZC2 230 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 TUBD1Q9UJT1 453 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 FZR1Q9UM11 496 aa14.78□□□□□ -0.04
VRK1-201ENST00000216639 ZFHX4Q86UP3 3567 aa14.77□□□□□ -0.04
VRK1-201ENST00000216639 A0A0G2JNJ9 132 aa14.77□□□□□ -0.05
VRK1-201ENST00000216639 SLC25A4P12235 298 aa14.77□□□□□ -0.05
VRK1-201ENST00000216639 RPA2P15927 270 aa14.77□□□□□ -0.05
VRK1-201ENST00000216639 S100A11P31949 105 aa14.77□□□□□ -0.05
VRK1-201ENST00000216639 PIGPP57054 158 aa14.77□□□□□ -0.05
VRK1-201ENST00000216639 ZNF146Q15072 292 aa14.77□□□□□ -0.05
VRK1-201ENST00000216639 PAN3Q58A45 887 aaKnown RBP14.77□□□□□ -0.05
VRK1-201ENST00000216639 Q6P435 159 aa14.77□□□□□ -0.05
VRK1-201ENST00000216639 TMEM65Q6PI78 240 aa14.77□□□□□ -0.05
VRK1-201ENST00000216639 CCDC71LQ8N9Z2 235 aa14.77□□□□□ -0.05
VRK1-201ENST00000216639 PPP1R1CQ8WVI7 109 aa14.77□□□□□ -0.05
VRK1-201ENST00000216639 FAM210AQ96ND0 272 aa14.77□□□□□ -0.05
VRK1-201ENST00000216639 VRK1Q99986 396 aaPredicted RBP14.77□□□□□ -0.05
VRK1-201ENST00000216639 SYT3Q9BQG1 590 aa14.77□□□□□ -0.05
VRK1-201ENST00000216639 METTL8Q9H825 291 aaKnown RBP14.77□□□□□ -0.05
VRK1-201ENST00000216639 Q9UFV3 132 aa14.77□□□□□ -0.05
VRK1-201ENST00000216639 RAXQ9Y2V3 346 aa14.77□□□□□ -0.05
VRK1-201ENST00000216639 ASPMQ8IZT6 3477 aa14.76□□□□□ -0.05
VRK1-201ENST00000216639 TRAV14DV4A0A0A6YYC5 116 aa14.76□□□□□ -0.05
VRK1-201ENST00000216639 A6NLC8 198 aa14.76□□□□□ -0.05
VRK1-201ENST00000216639 OR2H2O95918 312 aa14.76□□□□□ -0.05
VRK1-201ENST00000216639 PPYP01298 95 aa14.76□□□□□ -0.05
VRK1-201ENST00000216639 GLRXP35754 106 aa14.76□□□□□ -0.05
VRK1-201ENST00000216639 RPS23P62266 143 aaKnown RBP14.76□□□□□ -0.05
VRK1-201ENST00000216639 ANKRD55Q3KP44 614 aa14.76□□□□□ -0.05
VRK1-201ENST00000216639 IGSF11Q5DX21 431 aa14.76□□□□□ -0.05
VRK1-201ENST00000216639 SHEQ5VZ18 495 aa14.76□□□□□ -0.05
VRK1-201ENST00000216639 C11orf87Q6NUJ2 197 aa14.76□□□□□ -0.05
VRK1-201ENST00000216639 ZNF546Q86UE3 836 aa14.76□□□□□ -0.05
VRK1-201ENST00000216639 THAP6Q8TBB0 222 aa14.76□□□□□ -0.05
VRK1-201ENST00000216639 MRPL30Q8TCC3 161 aaKnown RBP14.76□□□□□ -0.05
VRK1-201ENST00000216639 MFFQ9GZY8 342 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms