RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 TMPRSS13Q9BYE2 586 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 AKIP1Q9NQ31 210 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 ANXA10Q9UJ72 324 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 NUP214P35658 2090 aaPredicted RBP9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 PATJQ8NI35 1801 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 FAM157AC9JC47 383 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 PYCARD-AS1I3L0S3 204 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 NDUFB6O95139 128 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 IGHV3-13P01766 116 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 IGHV3-7P01780 117 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 C1QBP02746 253 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 PXDC1Q5TGL8 231 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 TMEM104Q8NE00 496 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 ZPLD1Q8TCW7 415 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 IMMP1LQ96LU5 166 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 OR2V2Q96R30 315 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 NAA60Q9H7X0 242 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 LCTP09848 1927 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 TDRD6O60522 2096 aaKnown RBP9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 MS4A18H0YCH9 400 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 NTN3O00634 580 aaPredicted RBP9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 NDUFA2O43678 99 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 COX5BP10606 129 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 PRDX2P32119 198 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 TNXAQ16473 311 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 MS4A18Q3C1V0 323 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 Q6ZNX1 250 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 LHX4Q969G2 390 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 AP1S3Q96PC3 154 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 RAB40CQ96S21 281 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 PIPOXQ9P0Z9 390 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 SF3B6Q9Y3B4 125 aaKnown RBP9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 IGLV3-12A0A075B6K2 115 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 B3GALNT1O75752 331 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 OXA1LQ15070 435 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 ZNF658BQ4V348 819 aaPredicted RBP9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 FAM57AQ8TBR7 257 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 PCGF1Q9BSM1 259 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 AKIRIN1Q9H9L7 192 aaPredicted RBP9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 KCNE5Q9UJ90 142 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 SFT2D2O95562 160 aa9.02□□□□□ -0.96
NIPAL3-201ENST00000003912 LALBAP00709 142 aa9.02□□□□□ -0.96
NIPAL3-201ENST00000003912 RRASP10301 218 aa9.02□□□□□ -0.96
NIPAL3-201ENST00000003912 TMEM147Q9BVK8 224 aa9.02□□□□□ -0.96
NIPAL3-201ENST00000003912 MRPS18AQ9NVS2 196 aaKnown RBP9.02□□□□□ -0.96
NIPAL3-201ENST00000003912 CYB5R1Q9UHQ9 305 aa9.02□□□□□ -0.96
NIPAL3-201ENST00000003912 APC2O95996 2303 aa9.02□□□□□ -0.96
NIPAL3-201ENST00000003912 TTRP02766 147 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 PTHLHP12272 177 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 RAB4AP20338 218 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 ATP5J2P56134 94 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 ZFP82Q8N141 532 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 ZNF596Q8TC21 504 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 ADIRFQ15847 76 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 HIST2H3PS2Q5TEC6 136 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 FAM122CQ6P4D5 195 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 LCN15Q6UWW0 184 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 Q6ZT83 130 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 PPP1R1CQ8WVI7 109 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 MS4A3Q96HJ5 214 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 SLIRPQ9GZT3 109 aaKnown RBP9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 H3BP45 60 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 FBP1P09467 338 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 HLA-DRB3P79483 266 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 MPPED2Q15777 294 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 PFDN5Q99471 154 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 TXN2Q99757 166 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 RNF122Q9H9V4 155 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 RAB18Q9NP72 206 aa9.02□□□□□ -0.97
NIPAL3-201ENST00000003912 XKRY2A2RUG3 117 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 ATP6V1G2-DDX39BF2Z307 99 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 C1QCP02747 245 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 COL10A1Q03692 680 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 SURF2Q15527 256 aaPredicted RBP9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 TEX30Q5JUR7 227 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 GLDNQ6ZMI3 551 aaPredicted RBP9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 SPACA3Q8IXA5 215 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 ITLN1Q8WWA0 313 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 RASL12Q9NYN1 266 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 IL19Q9UHD0 177 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 ZNF835Q9Y2P0 537 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 MGST3O14880 152 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 SOCS1O15524 211 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 UMODP07911 640 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 LINC00271P0C7V0 271 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 IL13RA2Q14627 380 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 DBX2Q6ZNG2 339 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 OR8G5Q8NG78 346 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 MARC2Q969Z3 335 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 ADAT3Q96EY9 351 aaPredicted RBP9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 UQCC1Q9NVA1 299 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 RPL36A-HNRNPH2H7BZ11 118 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 MT-ND4LP03901 98 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 FAHD2BQ6P2I3 314 aaPredicted RBP9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 OR52B4Q8NGK2 314 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 TMEM45BQ96B21 275 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 FAHD2AQ96GK7 314 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 LINC00470Q9BZP3 86 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 AAMDCQ9H7C9 122 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 BIN3Q9NQY0 253 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms