RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Scgb1b12A0A087WP21 93 aa20.91■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Gm28285A0A087WQ54 102 aa20.91■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 4930444P10RikD3YUR1 185 aa20.91■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Vmn1r15Q14C10 299 aa20.91■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 AhrrQ3U1U7 701 aa20.91■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Npy6rQ61212 371 aa20.91■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Cd55Q61475 390 aa20.91■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Olfr988Q7TRA1 309 aa20.91■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Olfr571E9Q407 322 aa20.91■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Twist1P26687 206 aa20.91■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Rbp2Q08652 134 aa20.91■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Mfsd4b3Q3UN21 355 aa20.91■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Ntng2Q8R4F1 589 aaKnown RBP20.91■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Olfr1294Q8VGE5 312 aa20.91■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Rnf212bD3Z423 297 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Hes1P35428 282 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Slc25a4P48962 298 aaKnown RBP20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Ccr2P51683 373 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Rbp4Q00724 201 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Slc5a12Q49B93 619 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Adam12Q61824 903 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Olfr963Q7TRA9 311 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Olfr43Q7TRX1 313 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Olfr403Q7TRX2 313 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Mien1Q9CQ86 115 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Lrit3W8DXL4 681 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Gm45800A0A1B0GT24 152 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 St8sia5P70126 412 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Gabrg1Q9R0Y8 465 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Trbv21A0A0A6YX06 97 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Gm438B1ASB3 393 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Fut9O88819 359 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 P01668 110 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Fzd6Q61089 709 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Zc3h12dQ8BIY3 533 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Pqlc2Q8C4N4 293 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 DctdQ8K2D6 178 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Emc6Q9CQW0 110 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Slc50a1Q9CXK4 221 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Sec11cQ9D8V7 192 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Tex33Q9D9J2 266 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 SclyQ9JLI6 432 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Pet117P0DJF2 80 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Sap25Q1EHW4 186 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Gpatch2Q7TQC7 527 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Epdr1Q99M71 224 aa20.9■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Gm10778A0A087WNP5 499 aa20.89■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Olfr685A0A1L1SVG7 331 aa20.89■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Gm2663F6R7E8 247 aaKnown RBP20.89■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Fabp9O08716 132 aa20.89■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Mtatp6P00848 226 aa20.89■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Olfr996Q7TRA0 314 aa20.89■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Fbxo4Q8CHQ0 385 aa20.89■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Olfr60Q8VGL4 311 aa20.89■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 1810009J06RikQ9CPN7 247 aa20.89■□□□□ 0.94
Sh3rf1-201ENSMUST00000034060 Olfr1055A2AVX9 346 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 P01804 111 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Klkb1P26262 638 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 B020004J07RikQ3UTC0 476 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Rnf24Q8BGI1 148 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Foxq1O70220 400 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Mtnd6P03925 172 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Ier2P17950 221 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Rpl29P47915 160 aaKnown RBP20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Adprhl1Q8BGK2 353 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Irs1P35569 1233 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 ErhP84089 104 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 MplQ08351 625 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 PjvkQ0ZLH2 352 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Smim12Q78RX3 92 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Nsun3Q8CCT7 348 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Olfr1512Q8VF72 313 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Olfr994Q8VF73 314 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Slc48a1Q9D8M3 146 aa20.89■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Fam170bE9PXT9 378 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Olfr585E9PXW4 318 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 4930480E11RikQ0VG34 394 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Tox3Q80W03 575 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Nudt16l1Q8VHN8 211 aaKnown RBP20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Lgals8Q9JL15 316 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Igkv12-98A0A0G2JGF9 115 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 FcmrA1KXC4 422 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 FstP47931 344 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Tas2r41P59532 308 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Q5SPV6 233 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Rab40cQ8VHQ4 281 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Plekha3Q9ERS4 297 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Sp3O70494 783 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Rps23P62267 143 aaKnown RBP20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 PilrbQ2YFS2 224 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Kdm4dQ3U2K5 510 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Fstl4Q5STE3 841 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Olfr205Q7TS37 305 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Slc25a1Q8JZU2 311 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Arl13aQ9D416 372 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Ergic1Q9DC16 290 aaKnown RBP20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 2410141K09RikK7N769 464 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Zic1P46684 447 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Lrrtm3Q8BZ81 582 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Lancl3Q8CD19 420 aa20.88■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms