RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-229	ENST00000641891	SPEN	Q96T58	3664 aa	Known RBP	14.53	□□□□□ -0.08
PHGDH-229	ENST00000641891	CD82	P27701	267 aa		14.53	□□□□□ -0.08
PHGDH-229	ENST00000641891	TMEM187	Q14656	261 aa		14.53	□□□□□ -0.08
PHGDH-229	ENST00000641891	PAN3	Q58A45	887 aa	Known RBP	14.53	□□□□□ -0.08
PHGDH-229	ENST00000641891	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	14.53	□□□□□ -0.08
PHGDH-229	ENST00000641891	SAXO1	Q8IYX7	474 aa		14.53	□□□□□ -0.08
PHGDH-229	ENST00000641891	STPG2	Q8N412	459 aa		14.53	□□□□□ -0.08
PHGDH-229	ENST00000641891	OR5T2	Q8NGG2	359 aa		14.53	□□□□□ -0.08
PHGDH-229	ENST00000641891	OR5A2	Q8NGI9	324 aa		14.53	□□□□□ -0.08
PHGDH-229	ENST00000641891	STOML3	Q8TAV4	291 aa		14.53	□□□□□ -0.08
PHGDH-229	ENST00000641891	MOB3A	Q96BX8	217 aa		14.53	□□□□□ -0.08
PHGDH-229	ENST00000641891	DHRS9	Q9BPW9	319 aa		14.53	□□□□□ -0.08
PHGDH-229	ENST00000641891	SLC2A9	Q9NRM0	540 aa		14.53	□□□□□ -0.08
PHGDH-229	ENST00000641891	ZFHX4	Q86UP3	3567 aa		14.52	□□□□□ -0.08
PHGDH-229	ENST00000641891	TRAPPC2L	H3BP13	241 aa		14.52	□□□□□ -0.08
PHGDH-229	ENST00000641891	NOVA1	P51513	510 aa	Known RBP	14.52	□□□□□ -0.08
PHGDH-229	ENST00000641891	TSC22D1	Q15714	1073 aa		14.52	□□□□□ -0.08
PHGDH-229	ENST00000641891	AQP10	Q96PS8	301 aa		14.52	□□□□□ -0.08
PHGDH-229	ENST00000641891	HIST1H2AA	Q96QV6	131 aa		14.52	□□□□□ -0.08
PHGDH-229	ENST00000641891	MED12L	Q86YW9	2145 aa		14.52	□□□□□ -0.09
PHGDH-229	ENST00000641891	ANKRD30BL	A7E2S9	258 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	PRKACA	P17612	351 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	CA6	P23280	308 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	GLP1R	P43220	463 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	GALNT11	Q8NCW6	608 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	MEMO1	Q9Y316	297 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	FAM90A10P	A6NDY2	464 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	FAM90A18P	A6NE21	464 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	FAM90A16P	A6NEW6	464 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	FAM90A20P	A6NIJ5	464 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	FAM90A8P	A6NJQ4	464 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	FAM90A7P	A6NKC0	464 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	FAM90A22P	A8MWA6	464 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	FAM90A12P	A8MX19	464 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	FAM90A5P	A8MXJ8	464 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	FAM90A23P	A8MXZ1	464 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	SIGLEC5	O15389	551 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	FAM90A15P	P0C7V4	464 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	FAM90A13P	P0C7W8	464 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	FAM90A14P	P0C7W9	464 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	FAM90A24P	P0C7X0	464 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	TPT1	P13693	172 aa	Known RBP	14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	PMEL	P40967	661 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	ZNF585A	Q6P3V2	769 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	MKX	Q8IYA7	352 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	C17orf78	Q8N4C9	275 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	NANOS1	Q8WY41	292 aa	Known RBP	14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	CNTNAP3B	Q96NU0	1288 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	TRIB1	Q96RU8	372 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	CNTNAP3	Q9BZ76	1288 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	SLC5A7	Q9GZV3	580 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	MS4A7	Q9GZW8	240 aa	Predicted RBP	14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	SHARPIN	Q9H0F6	387 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	ZNF175	Q9Y473	711 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	FRY	Q5TBA9	3013 aa		14.51	□□□□□ -0.09
PHGDH-229	ENST00000641891	TTC28	Q96AY4	2481 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	LYZL6	O75951	148 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	SCGB1D2	O95969	90 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	PPY	P01298	95 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	SCT	P09683	121 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	PET100	P0DJ07	73 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	IGHV1-2	P23083	117 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	HERV-K104	P61576	105 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	OR2A2	Q6IF42	318 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	TFAP2E	Q6VUC0	442 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	LYZL2	Q7Z4W2	148 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	BAP18	Q8IXM2	172 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	TMED6	Q8WW62	240 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	GMPPA	Q96IJ6	420 aa	Predicted RBP	14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	OPA3	Q9H6K4	179 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	GP6	Q9HCN6	339 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891		Q9N2K0	584 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	OR2S2	Q9NQN1	319 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	RCC2	Q9P258	522 aa	Known RBP	14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	CLCF1	Q9UBD9	225 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	KCNIP3	Q9Y2W7	256 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	LSM5	Q9Y4Y9	91 aa	Known RBP	14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	CACNA1H	O95180	2353 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	CDK2AP1	O14519	115 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	BET1	O15155	118 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	RHBDL1	O75783	438 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	NAPSA	O96009	420 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	IFNA21	P01568	189 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	HKR1	P10072	659 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	ERVS71-1	P61550	626 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	SLC38A6	Q8IZM9	456 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	EIF4E3	Q8N5X7	224 aa	Known RBP	14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	NEK7	Q8TDX7	302 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	GALNT14	Q96FL9	552 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	RSRP1	Q9BUV0	290 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	ASF1B	Q9NVP2	202 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	TUBD1	Q9UJT1	453 aa		14.5	□□□□□ -0.09
PHGDH-229	ENST00000641891	ZNF14	P17017	642 aa	Predicted RBP	14.49	□□□□□ -0.09
PHGDH-229	ENST00000641891	HERPUD1	Q15011	391 aa		14.49	□□□□□ -0.09
PHGDH-229	ENST00000641891	OR1S2	Q8NGQ3	325 aa		14.49	□□□□□ -0.09
PHGDH-229	ENST00000641891	LHFPL5	Q8TAF8	219 aa		14.49	□□□□□ -0.09
PHGDH-229	ENST00000641891	TAS2R3	Q9NYW6	316 aa		14.49	□□□□□ -0.09
PHGDH-229	ENST00000641891	FAM186A	A6NE01	2351 aa		14.49	□□□□□ -0.09
PHGDH-229	ENST00000641891	OTOGL	Q3ZCN5	2332 aa		14.49	□□□□□ -0.09
PHGDH-229	ENST00000641891	SHANK1	Q9Y566	2161 aa		14.49	□□□□□ -0.09

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms