RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 DKK4Q9UBT3 224 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 STARD10Q9Y365 291 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 SESN1Q9Y6P5 492 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 TEX13DA0A0J9YY54 714 aaPredicted RBP12.94□□□□□ -0.34
TRIM3-215ENST00000639856 FAM221AA4D161 298 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 CRYM-AS1A6NIL9 109 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 F5H0A9 414 aaPredicted RBP12.94□□□□□ -0.34
TRIM3-215ENST00000639856 MKRN2OSH3BPM6 223 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 KCNAB3O43448 404 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 LYZL6O75951 148 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 NGFP01138 241 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 RBMXP38159 391 aaKnown RBP12.94□□□□□ -0.34
TRIM3-215ENST00000639856 PDCD1Q15116 288 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 TSC22D1Q15714 1073 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 CEACAM21Q3KPI0 293 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 PRSS54Q6PEW0 395 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 MDP1Q86V88 176 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 HPSE2Q8WWQ2 592 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 WNT2BQ93097 391 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 NARFLQ9H6Q4 476 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 ZNF286AQ9HBT8 521 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 C12orf4Q9NQ89 552 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 MSRB2Q9Y3D2 182 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 PRR14LQ5THK1 2151 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 OR7C1O76099 320 aaPredicted RBP12.94□□□□□ -0.34
TRIM3-215ENST00000639856 HOXB5P09067 269 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 IL15RAQ13261 267 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 FAM74A1Q5RGS3 127 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 TMEM211Q6ICI0 200 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 SLC22A25Q6T423 547 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 ZDHHC23Q8IYP9 409 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 SAXO1Q8IYX7 474 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 POC1AQ8NBT0 407 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 EXTL1Q92935 676 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 RRNAD1Q96FB5 475 aaKnown RBP12.94□□□□□ -0.34
TRIM3-215ENST00000639856 MARS2Q96GW9 593 aaKnown RBP12.94□□□□□ -0.34
TRIM3-215ENST00000639856 FGF23Q9GZV9 251 aaPredicted RBP12.94□□□□□ -0.34
TRIM3-215ENST00000639856 OPA3Q9H6K4 179 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 CRIM1Q9NZV1 1036 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 NUP50Q9UKX7 468 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 TP53TG5Q9Y2B4 290 aa12.94□□□□□ -0.34
TRIM3-215ENST00000639856 A0A1B0GW55 424 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 FAM90A10PA6NDY2 464 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 FAM90A18PA6NE21 464 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 FAM90A16PA6NEW6 464 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 FAM90A20PA6NIJ5 464 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 FAM90A8PA6NJQ4 464 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 FAM90A7PA6NKC0 464 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 FAM90A22PA8MWA6 464 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 FAM90A12PA8MX19 464 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 FAM90A5PA8MXJ8 464 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 A8MXK9 166 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 FAM90A23PA8MXZ1 464 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 AHRRA9YTQ3 701 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 FAM90A15PP0C7V4 464 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 FAM90A13PP0C7W8 464 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 FAM90A14PP0C7W9 464 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 FAM90A24PP0C7X0 464 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 DUX4L2P0CJ85 424 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 DUX4L3P0CJ86 424 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 DUX4L4P0CJ87 422 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 DUX4L5P0CJ88 424 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 DUX4L6P0CJ89 424 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 DUX4L7P0CJ90 424 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 ZP3P21754 424 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 HAAOP46952 286 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 GPM6AP51674 278 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 ELP2Q6IA86 826 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 SEM1Q6ZVN7 128 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 HSD17B13Q7Z5P4 300 aaPredicted RBP12.93□□□□□ -0.34
TRIM3-215ENST00000639856 DPPA2Q7Z7J5 298 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 MYPOPQ86VE0 399 aaPredicted RBP12.93□□□□□ -0.34
TRIM3-215ENST00000639856 TMEM200AQ86VY9 491 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 ZNF442Q9H7R0 627 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 DUX4Q9UBX2 424 aa12.93□□□□□ -0.34
TRIM3-215ENST00000639856 F8VVB4 439 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 F8VWA3 439 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 FGF2P09038 288 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 PET100P0DJ07 73 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 PIGPP57054 158 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 RAB32Q13637 225 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 SNTB1Q13884 538 aaKnown RBP12.92□□□□□ -0.34
TRIM3-215ENST00000639856 BATF2Q8N1L9 274 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 EIF4E3Q8N5X7 224 aaKnown RBP12.92□□□□□ -0.34
TRIM3-215ENST00000639856 TOMM40LQ969M1 308 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 PIK3IP1Q96FE7 263 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 OR51B6Q9H340 312 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 OR5AC2Q9NZP5 309 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 ZNF629Q9UEG4 869 aaPredicted RBP12.92□□□□□ -0.34
TRIM3-215ENST00000639856 BSNQ9UPA5 3926 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 CELA3BP08861 270 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 ZNF728P0DKX0 622 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 BCL3P20749 454 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 APLNRP35414 380 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 WNT5AP41221 380 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 FGF12P61328 243 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 RBM39Q14498 530 aaKnown RBP12.92□□□□□ -0.34
TRIM3-215ENST00000639856 PAN3Q58A45 887 aaKnown RBP12.92□□□□□ -0.34
TRIM3-215ENST00000639856 UNQ6126/PRO20091Q6UXV3 157 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 Q6ZPA2 131 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms