RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 BOLA1Q9Y3E2 137 aa10.42□□□□□ -0.74
CACNA1D-228ENST00000638120 FAM172BPA6NC97 362 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 C1QTNF9BB2RNN3 333 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 G3V3Q6 166 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 C1QTNF9P0C862 333 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 ECI1P42126 302 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 RAP2BP61225 183 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 IFITM2Q01629 132 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 KLRB1Q12918 225 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 SURF2Q15527 256 aaPredicted RBP10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 MPPED2Q15777 294 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 ZNF660Q6AZW8 331 aaPredicted RBP10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 ALKBH2Q6NS38 261 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 Q6ZR03 302 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 UXS1Q8NBZ7 420 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 ADAD2Q8NCV1 583 aaKnown RBP10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 OR2T35Q8NGX2 323 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 NRIP2Q9BQI9 281 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 CHIAQ9BZP6 476 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 C5orf66Q9H5L9 145 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 PLSCR3Q9NRY6 295 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 SPEF1Q9Y4P9 236 aa10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 TLN1Q9Y490 2541 aaKnown RBP10.41□□□□□ -0.74
CACNA1D-228ENST00000638120 MAP1BP46821 2468 aaKnown RBP10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 C9orf170A2RU37 121 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 OR5H14A6NHG9 310 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 MCRIP1C9JLW8 97 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 GOSR2O14653 212 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 NAPSAO96009 420 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 ACAA1P09110 424 aaPredicted RBP10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 OR5H8P0DN80 308 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 DNASE1P24855 282 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 DUSP1P28562 367 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 ID4P47928 161 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 H2BFSP57053 126 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 NKX6-1P78426 367 aaPredicted RBP10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 SRSF7Q16629 238 aaKnown RBP eCLIP10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 SLC22A25Q6T423 547 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 Q6ZS49 121 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 SPERTQ8NA61 448 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 TMEM185AQ8NFB2 350 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 OR11H4Q8NGC9 324 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 GTF3AQ92664 365 aaKnown RBP10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 TMEM230Q96A57 120 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 ZNF2Q9BSG1 426 aaPredicted RBP10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 TLNRD1Q9H1K6 362 aa10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 DSPP15924 2871 aaKnown RBP10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 RP1L1Q8IWN7 2480 aaPredicted RBP10.4□□□□□ -0.74
CACNA1D-228ENST00000638120 C16orf97H3BN30 126 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 CDIPTO14735 213 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 SLC22A5O76082 557 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 GLAP06280 429 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 GRPP07492 148 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 ZNF250P15622 560 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 AKR1C4P17516 323 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 CD34P28906 385 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 GLRXP35754 106 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 IL13RA1P78552 427 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 DHODHQ02127 395 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 MSMPQ1L6U9 139 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 TMEM128Q5BJH2 165 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 LAMTOR1Q6IAA8 161 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 C22orf34Q6ZV56 151 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 C9orf62Q8N4C0 152 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 SUMF2Q8NBJ7 301 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 POC1AQ8NBT0 407 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 MITD1Q8WV92 249 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 ASB13Q8WXK3 278 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 DMRTA2Q96SC8 542 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 VKORC1Q9BQB6 163 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 CHMP1AQ9HD42 196 aaPredicted RBP10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 DECR2Q9NUI1 292 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 OPN4Q9UHM6 478 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 PAIP2BQ9ULR5 123 aaKnown RBP10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 MGAT4AQ9UM21 535 aa10.4□□□□□ -0.75
CACNA1D-228ENST00000638120 TRAV24A0A0B4J272 114 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 C3orf80F5H4A9 247 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 F5H5P2 479 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 NOS1APO75052 506 aaPredicted RBP10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 SIX6O95475 246 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 GSTT2P0CG29 244 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 VAMP1P23763 118 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 BAMBIQ13145 260 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 DCAF12L2Q5VW00 463 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 Q6P435 159 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 C11orf88Q6PI97 169 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 NEK7Q8TDX7 302 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 RND1Q92730 232 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 TMEM246Q9BRR3 403 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 RTBDNQ9BSG5 229 aaPredicted RBP10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 WDR13Q9H1Z4 485 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 HES4Q9HCC6 221 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 MSL2Q9HCI7 577 aa10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 HEATR1Q9H583 2144 aaKnown RBP10.39□□□□□ -0.75
CACNA1D-228ENST00000638120 ATP6V1G2-DDX39BF2Z307 99 aa10.38□□□□□ -0.75
CACNA1D-228ENST00000638120 HSPB6O14558 160 aa10.38□□□□□ -0.75
CACNA1D-228ENST00000638120 RGS13O14921 159 aa10.38□□□□□ -0.75
CACNA1D-228ENST00000638120 NXPH2O95156 264 aa10.38□□□□□ -0.75
CACNA1D-228ENST00000638120 DUS4LO95620 317 aaKnown RBP10.38□□□□□ -0.75
CACNA1D-228ENST00000638120 IGHV3-13P01766 116 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms