RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 RDH5Q92781 318 aa18.39■□□□□ 0.53
CHRNA7-228ENST00000637519 PIGMQ9H3S5 423 aa18.39■□□□□ 0.53
CHRNA7-228ENST00000637519 CHMP1AQ9HD42 196 aaPredicted RBP18.39■□□□□ 0.53
CHRNA7-228ENST00000637519 ADGRG4Q8IZF6 3080 aa18.39■□□□□ 0.53
CHRNA7-228ENST00000637519 FAM90A10PA6NDY2 464 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 FAM90A18PA6NE21 464 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 FAM90A16PA6NEW6 464 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 FAM90A20PA6NIJ5 464 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 FAM90A8PA6NJQ4 464 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 FAM90A7PA6NKC0 464 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 FAM90A22PA8MWA6 464 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 FAM90A12PA8MX19 464 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 FAM90A5PA8MXJ8 464 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 FAM90A23PA8MXZ1 464 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 H3BUI4 141 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 FAM90A15PP0C7V4 464 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 FAM90A13PP0C7W8 464 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 FAM90A14PP0C7W9 464 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 FAM90A24PP0C7X0 464 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 ZBTB25P24278 435 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 MPPED2Q15777 294 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 TMEM230Q96A57 120 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 PCNX1Q96RV3 2341 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 ZNF2Q9BSG1 426 aaPredicted RBP18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 TUBD1Q9UJT1 453 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 MGAT4AQ9UM21 535 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 TRAV24A0A0B4J272 114 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 TRGV8A0A0C4DH27 118 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 CRYAAP02489 173 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 MPV17LQ2QL34 196 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 C12orf45Q8N5I9 185 aaPredicted RBP18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 SUMF2Q8NBJ7 301 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 SYT3Q9BQG1 590 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 WDR13Q9H1Z4 485 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 MYOZ1Q9NP98 299 aaPredicted RBP18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 UFSP2Q9NUQ7 469 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 EDARQ9UNE0 448 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 GPR132Q9UNW8 380 aa18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 NOP16Q9Y3C1 178 aaKnown RBP18.38■□□□□ 0.53
CHRNA7-228ENST00000637519 ATXN7O15265 892 aaPredicted RBP18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 OR5H8P0DN80 308 aa18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 C11orf88Q6PI97 169 aa18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 TMEM17Q86X19 198 aa18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 ZFAND1Q8TCF1 268 aa18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 ZCCHC14Q8WYQ9 949 aaKnown RBP18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 PRR13Q9NZ81 148 aa18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 C9orf170A2RU37 121 aa18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 CCSO14618 274 aa18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 WNT9BO14905 357 aa18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 GSTT2P0CG29 244 aa18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 ZNF44P15621 663 aa18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 FPR2P25090 351 aa18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 RBPJQ06330 500 aa18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 UNQ6494/PRO21346Q6UXR6 183 aa18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 LYG2Q86SG7 212 aa18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 RTBDNQ9BSG5 229 aaPredicted RBP18.37■□□□□ 0.53
CHRNA7-228ENST00000637519 A6NLC8 198 aa18.36■□□□□ 0.53
CHRNA7-228ENST00000637519 SLC22A5O76082 557 aa18.36■□□□□ 0.53
CHRNA7-228ENST00000637519 PGA5P0DJD9 388 aa18.36■□□□□ 0.53
CHRNA7-228ENST00000637519 GLRA1P23415 457 aa18.36■□□□□ 0.53
CHRNA7-228ENST00000637519 DNASE1P24855 282 aa18.36■□□□□ 0.53
CHRNA7-228ENST00000637519 CEBPDP49716 269 aaPredicted RBP18.36■□□□□ 0.53
CHRNA7-228ENST00000637519 ERVK11-1P61568 191 aa18.36■□□□□ 0.53
CHRNA7-228ENST00000637519 IL13RA1P78552 427 aa18.36■□□□□ 0.53
CHRNA7-228ENST00000637519 C11orf53Q8IXP5 236 aa18.36■□□□□ 0.53
CHRNA7-228ENST00000637519 HYLS1Q96M11 299 aa18.36■□□□□ 0.53
CHRNA7-228ENST00000637519 NRIP2Q9BQI9 281 aa18.36■□□□□ 0.53
CHRNA7-228ENST00000637519 TMEM246Q9BRR3 403 aa18.36■□□□□ 0.53
CHRNA7-228ENST00000637519 POLDIP2Q9Y2S7 368 aa18.36■□□□□ 0.53
CHRNA7-228ENST00000637519 HSPB11Q9Y547 144 aa18.36■□□□□ 0.53
CHRNA7-228ENST00000637519 SIRPB1O00241 398 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 NXPH2O95156 264 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 TFF1P04155 84 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 CD34P28906 385 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 KLRB1Q12918 225 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 ZNF660Q6AZW8 331 aaPredicted RBP18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 TMEM211Q6ICI0 200 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 PEG10Q86TG7 708 aaKnown RBP18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 WFDC8Q8IUA0 241 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 C9orf62Q8N4C0 152 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 CXXC4Q9H2H0 198 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 PLK3Q9H4B4 646 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 ZNF286AQ9HBT8 521 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 SMG1Q96Q15 3661 aaKnown RBP18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 MCRIP1C9JLW8 97 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 C16orf97H3BN30 126 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 NKX6-1P78426 367 aaPredicted RBP18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 IGSF11Q5DX21 431 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 LY6G6FQ5SQ64 297 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 C20orf204Q6ZNR8 217 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 OR2Z1Q8NG97 314 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 NECAP2Q9NVZ3 263 aa18.35■□□□□ 0.53
CHRNA7-228ENST00000637519 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 ZSCAN5BA6NJL1 495 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 TMEM210A6NLX4 147 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 CEACAM18A8MTB9 384 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 GIPP09681 153 aaPredicted RBP18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 PGAM2P15259 253 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 IL13RA2Q14627 380 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 SPRNQ5BIV9 151 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms