RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 TCF15Q12870 199 aa12.58□□□□□ -0.4
CLN6-215ENST00000636674 CLEC9AQ6UXN8 241 aa12.58□□□□□ -0.4
CLN6-215ENST00000636674 DYRK2Q92630 601 aa12.58□□□□□ -0.4
CLN6-215ENST00000636674 TCEAL7Q9BRU2 100 aa12.58□□□□□ -0.4
CLN6-215ENST00000636674 IER2Q9BTL4 223 aa12.58□□□□□ -0.4
CLN6-215ENST00000636674 EIF5A2Q9GZV4 153 aaKnown RBP12.58□□□□□ -0.4
CLN6-215ENST00000636674 SH3BGRL3Q9H299 93 aa12.58□□□□□ -0.4
CLN6-215ENST00000636674 SEBOXQ9HB31 216 aaPredicted RBP12.58□□□□□ -0.4
CLN6-215ENST00000636674 ST3GAL6Q9Y274 331 aa12.58□□□□□ -0.4
CLN6-215ENST00000636674 ARID1AO14497 2285 aa12.58□□□□□ -0.4
CLN6-215ENST00000636674 TNRC6BQ9UPQ9 1833 aaKnown RBP12.58□□□□□ -0.4
CLN6-215ENST00000636674 PHF1O43189 567 aaPredicted RBP12.57□□□□□ -0.4
CLN6-215ENST00000636674 ZNF32P17041 273 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 TCN2P20062 427 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 AKR1C3P42330 323 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 FHITP49789 147 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 HERV-K104P61576 105 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 EWSR1Q01844 656 aaKnown RBP eCLIP12.57□□□□□ -0.47e-6■■□□□ 12.2
CLN6-215ENST00000636674 MALLQ13021 153 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 IL11RAQ14626 422 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 GNMTQ14749 295 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 SRSF7Q16629 238 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLN6-215ENST00000636674 TRIM61Q5EBN2 209 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 Q6ZPA2 131 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 SLC35G3Q8N808 338 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 Q8NFD4 153 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 IP6K3Q96PC2 410 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 OCIAD1Q9NX40 245 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 WDFY4Q6ZS81 3184 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 FAM90A10PA6NDY2 464 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 FAM90A18PA6NE21 464 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 FAM90A16PA6NEW6 464 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 FAM90A20PA6NIJ5 464 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 FAM90A8PA6NJQ4 464 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 FAM90A7PA6NKC0 464 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 ZNF716A6NP11 495 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 FAM90A22PA8MWA6 464 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 FAM90A12PA8MX19 464 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 FAM90A5PA8MXJ8 464 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 FAM90A23PA8MXZ1 464 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 K7ESF4 209 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 PITX3O75364 302 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 PPYP01298 95 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 IGHV2-5P01817 119 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 PRH1P02810 166 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 S100A6P06703 90 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 FAM90A15PP0C7V4 464 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 FAM90A13PP0C7W8 464 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 FAM90A14PP0C7W9 464 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 FAM90A24PP0C7X0 464 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 RAB5AP20339 215 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 AADACP22760 399 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 B3GALT5-AS1P59052 145 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 RND3P61587 244 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 NHLH2Q02577 135 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 ZNF266Q14584 549 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 RIPPLY2Q5TAB7 128 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 OR11L1Q8NGX0 322 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 SAP25Q8TEE9 199 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 TP53RKQ96S44 253 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 CRLF2Q9HC73 371 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 KCNJ16Q9NPI9 418 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 SLC7A11Q9UPY5 501 aa12.57□□□□□ -0.4
CLN6-215ENST00000636674 A0A1W2PPH5 198 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 A6NLC8 198 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 TRDCB7Z8K6 153 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 M0R036 132 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 ZNF205O95201 554 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 FUT3P21217 361 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 HTR5AP47898 357 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 SULT1A1P50225 295 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 CLINT1Q14677 625 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 DAZAP2Q15038 168 aaPredicted RBP12.56□□□□□ -0.4
CLN6-215ENST00000636674 AKIRIN2Q53H80 203 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 ABLIM2Q6H8Q1 611 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 OR2C3Q8N628 320 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 KCNE4Q8WWG9 221 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 NAT6Q93015 286 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 SPSB4Q96A44 273 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 TMEM56Q96MV1 263 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 SPIN2AQ99865 258 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 SPIN2BQ9BPZ2 258 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 ZNF251Q9BRH9 671 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 TMEM222Q9H0R3 208 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 HS3ST3B1Q9Y662 390 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 TMEM56-RWDD3S4R434 201 aa12.56□□□□□ -0.4
CLN6-215ENST00000636674 ZNF816-ZNF321PA0A0X1KG74 233 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 C3orf85A0A1B0GTC6 90 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 DUXBA0A1W2PPF3 345 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 MPPED1O15442 326 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 C1QL1O75973 258 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 SRD5A2P31213 254 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 MLF1P58340 268 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 PCBD1P61457 104 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 PSG4Q00888 419 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 C1QL4Q86Z23 238 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 HSD17B11Q8NBQ5 300 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 OR2H1Q9GZK4 316 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 WNT5BQ9H1J7 359 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 SHANK1Q9Y566 2161 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms