RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 A0A0A6YYH2 397 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 A6NJ64 397 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 G3V3Q6 166 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 SULT1C2O00338 296 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 CCR6P51684 374 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 ZP1P60852 638 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 ZNF154Q13106 437 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 TMEM69Q5SWH9 247 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 ZNF626Q68DY1 528 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 SCCPDHQ8NBX0 429 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 OR8H1Q8NGG4 311 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 IGFBPL1Q8WX77 278 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 CPNE2Q96FN4 548 aaPredicted RBP12.21□□□□□ -0.46
LINC00339-208ENST00000634934 ALX4Q9H161 411 aaPredicted RBP12.21□□□□□ -0.46
LINC00339-208ENST00000634934 FN3KRPQ9HA64 309 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 MYOZ1Q9NP98 299 aaPredicted RBP12.21□□□□□ -0.46
LINC00339-208ENST00000634934 C1orf123Q9NWV4 160 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 MTFP1Q9UDX5 166 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 STEAP1Q9UHE8 339 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 EDARQ9UNE0 448 aa12.21□□□□□ -0.46
LINC00339-208ENST00000634934 hCG_1807616A0A1W2PRN6 198 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 HMSDA8MTL9 139 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 CDIPTO14735 213 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 CDC14BO60729 498 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 NDUFS7O75251 213 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 MT-ND4P03905 459 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 CSF1P09603 554 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 GRK1Q15835 563 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 LGALSLQ3ZCW2 172 aaPredicted RBP12.2□□□□□ -0.46
LINC00339-208ENST00000634934 FAM76BQ5HYJ3 339 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 ZNF826PQ6ZT77 177 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 CALHM1Q8IU99 346 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 PNLDC1Q8NA58 520 aaKnown RBP12.2□□□□□ -0.46
LINC00339-208ENST00000634934 TNFAIP8L1Q8WVP5 186 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 NEU4Q8WWR8 484 aaPredicted RBP12.2□□□□□ -0.46
LINC00339-208ENST00000634934 METTL17Q9H7H0 456 aaPredicted RBP12.2□□□□□ -0.46
LINC00339-208ENST00000634934 AUNIPQ9H7T9 357 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 KIF25Q9UIL4 384 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 PPP1R3CQ9UQK1 317 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 USF3Q68DE3 2245 aa12.2□□□□□ -0.46
LINC00339-208ENST00000634934 RPS10-NUDT3A0A1W2PQS6 291 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 SMLR1H3BR10 107 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 SPRY1O43609 319 aaPredicted RBP12.19□□□□□ -0.46
LINC00339-208ENST00000634934 SSNA1O43805 119 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 LY6HO94772 140 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 PTBP3O95758 552 aaKnown RBP12.19□□□□□ -0.46
LINC00339-208ENST00000634934 TMEM225BP0DP42 221 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 GATA4P43694 442 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 OR3A4PP47883 348 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 TAS2R20P59543 309 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 BAMBIQ13145 260 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 FAM166AQ6J272 317 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 SLC25A26Q70HW3 274 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 PTX4Q96A99 478 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 FOXRED1Q96CU9 486 aaPredicted RBP12.19□□□□□ -0.46
LINC00339-208ENST00000634934 CNTD2Q9H8S5 307 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 GCM1Q9NP62 436 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 UBQLN2Q9UHD9 624 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 NUP50Q9UKX7 468 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 MRPS7Q9Y2R9 242 aaKnown RBP12.19□□□□□ -0.46
LINC00339-208ENST00000634934 OTOGQ6ZRI0 2925 aa12.19□□□□□ -0.46
LINC00339-208ENST00000634934 A0A0B4J203 849 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 IGHV1-69-2A0A0G2JMI3 117 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 LYNX1G3V0Z9 82 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 J3QT63 122 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 SYNGR1O43759 233 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 ANGPTL7O43827 346 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 CREBL2O60519 120 aaPredicted RBP12.18□□□□□ -0.46
LINC00339-208ENST00000634934 RHBDL1O75783 438 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 CYB5AP00167 134 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 F12P00748 615 aaPredicted RBP12.18□□□□□ -0.46
LINC00339-208ENST00000634934 LYNX1P0DP58 116 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 CDK2P24941 298 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 RBMXP38159 391 aaKnown RBP12.18□□□□□ -0.46
LINC00339-208ENST00000634934 PMELP40967 661 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 EFNA4P52798 201 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 PDZK1IP1Q13113 114 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 RBMS2Q15434 407 aaKnown RBP12.18□□□□□ -0.46
LINC00339-208ENST00000634934 HES5Q5TA89 166 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 CRIP3Q6Q6R5 217 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 NLRC3Q7RTR2 1065 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 TGIF2LYQ8IUE0 185 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 C11orf53Q8IXP5 236 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 OR11L1Q8NGX0 322 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 AQP3Q92482 292 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 CCL17Q92583 94 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 ERGIC1Q969X5 290 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 UQCC2Q9BRT2 126 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 TLNRD1Q9H1K6 362 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 SCPEP1Q9HB40 452 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 ELL3Q9HB65 397 aaPredicted RBP12.18□□□□□ -0.46
LINC00339-208ENST00000634934 MAB21L2Q9Y586 359 aa12.18□□□□□ -0.46
LINC00339-208ENST00000634934 SLC17A2O00624 439 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 CRYZL1O95825 349 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 IRF2P14316 349 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 DAOP14920 347 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 PTGFRP43088 359 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 ATP5J2P56134 94 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 GMFBP60983 142 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 RAB11BQ15907 218 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms