RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 F5H5P2 479 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 HLA-AP01891 365 aaKnown RBP12.14□□□□□ -0.47
LIMS4-204ENST00000632897 CD34P28906 385 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 MPV17P39210 176 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 RBPJQ06330 500 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 KLRB1Q12918 225 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 OR8G1Q15617 311 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 Q6ZS49 121 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 MRGPRGQ86SM5 289 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 FAM58AQ8N1B3 248 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 C9orf62Q8N4C0 152 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 TMEM185AQ8NFB2 350 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 GTF3AQ92664 365 aaKnown RBP12.14□□□□□ -0.47
LIMS4-204ENST00000632897 S100PBPQ96BU1 408 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 MUCL1Q96DR8 90 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 DHRS9Q9BPW9 319 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 GON7Q9BXV9 100 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 IFT22Q9H7X7 185 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 FN3KRPQ9HA64 309 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 TMEM100Q9NV29 134 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 MGAT4AQ9UM21 535 aa12.14□□□□□ -0.47
LIMS4-204ENST00000632897 IGKV1D-8A0A087WSZ0 117 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 C9orf170A2RU37 121 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 A8MXE2 369 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 F8VVB4 439 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 F8VWA3 439 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 GOSR2O14653 212 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 RGS11O94810 467 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 ACAA1P09110 424 aaPredicted RBP12.13□□□□□ -0.47
LIMS4-204ENST00000632897 PRKACAP17612 351 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 GCH1P30793 250 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 CALCRP30988 508 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 NPY4RP50391 375 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 NAAAQ02083 359 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 DHODHQ02127 395 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 PPP1R1AQ13522 171 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 AADACL3Q5VUY0 350 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 C3P1Q6ZMU1 363 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 C17orf107Q6ZR85 190 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 SPERTQ8NA61 448 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 MITD1Q8WV92 249 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 SNRNP40Q96DI7 357 aaKnown RBP12.13□□□□□ -0.47
LIMS4-204ENST00000632897 PHB2Q99623 299 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 TMEM246Q9BRR3 403 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 CHIAQ9BZP6 476 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 RIMS4Q9H426 269 aaPredicted RBP12.13□□□□□ -0.47
LIMS4-204ENST00000632897 PLSCR3Q9NRY6 295 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 SPEF1Q9Y4P9 236 aa12.13□□□□□ -0.47
LIMS4-204ENST00000632897 MCRIP1C9JLW8 97 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 G3V3Q6 166 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 SDCBPO00560 298 aaPredicted RBP12.12□□□□□ -0.47
LIMS4-204ENST00000632897 SLC22A5O76082 557 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 DUS4LO95620 317 aaKnown RBP12.12□□□□□ -0.47
LIMS4-204ENST00000632897 OR5H8P0DN80 308 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 HLA-GP17693 338 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 IL13RA1P78552 427 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 MZT1Q08AG7 82 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 IKZF1Q13422 519 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 ALKBH6Q3KRA9 238 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 TMEM128Q5BJH2 165 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 LAMTOR1Q6IAA8 161 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 C11orf88Q6PI97 169 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 WDR86Q86TI4 376 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 ASCC1Q8N9N2 400 aaKnown RBP12.12□□□□□ -0.47
LIMS4-204ENST00000632897 SCCPDHQ8NBX0 429 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 UXS1Q8NBZ7 420 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 ADAD2Q8NCV1 583 aaKnown RBP12.12□□□□□ -0.47
LIMS4-204ENST00000632897 TMPRSS13Q9BYE2 586 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 CXXC4Q9H2H0 198 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 C5orf66Q9H5L9 145 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 ELOVL5Q9NYP7 299 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 OPN4Q9UHM6 478 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 BOLA1Q9Y3E2 137 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 HSPB11Q9Y547 144 aa12.12□□□□□ -0.47
LIMS4-204ENST00000632897 INTS1Q8N201 2190 aaKnown RBP12.11□□□□□ -0.47
LIMS4-204ENST00000632897 A0A0B4J2A0 478 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 A0A1B0GWJ7 208 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 POM121CA8CG34 1229 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 TIMM8AO60220 97 aaPredicted RBP12.11□□□□□ -0.47
LIMS4-204ENST00000632897 PGA5P0DJD9 388 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 ZNF83P51522 516 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 ERVK11-1P61568 191 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 SRSF4Q08170 494 aaKnown RBP12.11□□□□□ -0.47
LIMS4-204ENST00000632897 PDCD1Q15116 288 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 LIN54Q6MZP7 749 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 DHRS11Q6UWP2 260 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 SSX8Q7RTT4 187 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 BATF2Q8N1L9 274 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 OR11H4Q8NGC9 324 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 OR5M8Q8NGP6 311 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 DYRK2Q92630 601 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 HS3ST6Q96QI5 342 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 CHMP1AQ9HD42 196 aaPredicted RBP12.11□□□□□ -0.47
LIMS4-204ENST00000632897 DECR2Q9NUI1 292 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 SHPKQ9UHJ6 478 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 TENM4Q6N022 2769 aa12.11□□□□□ -0.47
LIMS4-204ENST00000632897 SETXQ7Z333 2677 aaKnown RBP12.1□□□□□ -0.47
LIMS4-204ENST00000632897 A0A0G2JNJ9 132 aa12.1□□□□□ -0.47
LIMS4-204ENST00000632897 OR5H14A6NHG9 310 aa12.1□□□□□ -0.47
LIMS4-204ENST00000632897 EEF1E1-BLOC1S5C9J1V9 151 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms