RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 LINC00862A6NCI5 91 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 GGT3PA6NGU5 568 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 ANXA2P2A6NMY6 339 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 SNRPGP15A8MWD9 76 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 NDUFS8O00217 210 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 KHDRBS3O75525 346 aaKnown RBP4.1□□□□□ -1.75
LINC00550-201ENST00000629293 PMS2P2O95744 297 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 ALDH3B1P43353 468 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 EFNB2P52799 333 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 CLDN17P56750 224 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 NAAAQ02083 359 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 LGALSLQ3ZCW2 172 aaPredicted RBP4.1□□□□□ -1.75
LINC00550-201ENST00000629293 SLC25A53Q5H9E4 307 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF626Q68DY1 528 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 SFRP4Q6FHJ7 346 aaPredicted RBP4.1□□□□□ -1.75
LINC00550-201ENST00000629293 TEX261Q6UWH6 196 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 MYPOPQ86VE0 399 aaPredicted RBP4.1□□□□□ -1.75
LINC00550-201ENST00000629293 LYPD6Q86Y78 171 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 WDFY1Q8IWB7 410 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 LINC01356Q8N9X3 169 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 SLC26A10Q8NG04 563 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF418Q8TF45 676 aaPredicted RBP4.1□□□□□ -1.75
LINC00550-201ENST00000629293 ASB10Q8WXI3 467 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 U3KQ87 197 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 RPS10-NUDT3A0A1W2PQS6 291 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 ARPC1BO15143 372 aaKnown RBP4.09□□□□□ -1.75
LINC00550-201ENST00000629293 OR2T1O43869 369 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 SLC16A7O60669 478 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 OR2A4O95047 310 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 OR2C1O95371 312 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 AHSA1O95433 338 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 MPC2O95563 127 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 HLA-HP01893 362 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 MAS1P04201 325 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 CALCRP30988 508 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 GPR6P46095 362 aaPredicted RBP4.09□□□□□ -1.75
LINC00550-201ENST00000629293 ARF1P84077 181 aaKnown RBP4.09□□□□□ -1.75
LINC00550-201ENST00000629293 SSBP1Q04837 148 aaKnown RBP4.09□□□□□ -1.75
LINC00550-201ENST00000629293 NHLRC1Q6VVB1 395 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 SLC35D2Q76EJ3 337 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 SLC36A1Q7Z2H8 476 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 ST7LQ8TDW4 575 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 OR2A7Q96R45 310 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 ABHD6Q9BV23 337 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 SLC22A13Q9Y226 551 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 LRP12Q9Y561 859 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 LOC105371242A0A075B767 164 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 TMEM272A0A1B0GTI8 110 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 MS4A18H0YCH9 400 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 SSNA1O43805 119 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 SLC22A5O76082 557 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 ISG15P05161 165 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 MELTFP08582 738 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 SPARCP09486 303 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 GIPP09681 153 aaPredicted RBP4.09□□□□□ -1.75
LINC00550-201ENST00000629293 HLA-DOBP13765 273 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF43P17038 809 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 CRABP1P29762 137 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 PPIFP30405 207 aaKnown RBP4.09□□□□□ -1.75
LINC00550-201ENST00000629293 POU3F4P49335 361 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 MELKQ14680 651 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 RAB11BQ15907 218 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 CEACAM16Q2WEN9 425 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 MS4A18Q3C1V0 323 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 AVPI1Q5T686 147 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 OTPQ5XKR4 325 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 FAAP20Q6NZ36 180 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 ABHD12BQ7Z5M8 362 aaPredicted RBP4.09□□□□□ -1.75
LINC00550-201ENST00000629293 GPR137CQ8N3F9 429 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 C17orf78Q8N4C9 275 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 UXS1Q8NBZ7 420 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF680Q8NEM1 530 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 OR51D1Q8NGF3 324 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 OR4C16Q8NGL9 310 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 MFSD8Q8NHS3 518 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 ANGPTL6Q8NI99 470 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 TSEN15Q8WW01 171 aaKnown RBP4.09□□□□□ -1.75
LINC00550-201ENST00000629293 SEC22CQ9BRL7 303 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 EMC6Q9BV81 110 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 BEX1Q9HBH7 125 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 NOX3Q9HBY0 568 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 DIABLOQ9NR28 239 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 PPIAL4AQ9Y536 164 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 R4GMQ9 66 aa4.09□□□□□ -1.75
LINC00550-201ENST00000629293 VWFP04275 2813 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 A6NIZ1 184 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 LEUTXA8MZ59 168 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 VWC2LB2RUY7 222 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 M0R233 179 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 WNT9BO14905 357 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF208O43345 1280 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 KDM4BO94953 1096 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 ELANEP08246 267 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 ANXA7P20073 488 aaKnown RBP4.09□□□□□ -1.76
LINC00550-201ENST00000629293 OR3A3P47888 321 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 RIDAP52758 137 aaKnown RBP4.09□□□□□ -1.76
LINC00550-201ENST00000629293 P2RX3P56373 397 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 RAP1BP61224 184 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 RAP1AP62834 184 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 GLO1Q04760 184 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms