RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 CREB3L1Q96BA8 519 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 MARVELD1Q9BSK0 173 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 POU2F3Q9UKI9 436 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 ANAPC10Q9UM13 185 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM90A10PA6NDY2 464 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM90A18PA6NE21 464 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM90A16PA6NEW6 464 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM90A20PA6NIJ5 464 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM90A8PA6NJQ4 464 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM90A7PA6NKC0 464 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM90A22PA8MWA6 464 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM90A12PA8MX19 464 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM90A5PA8MXJ8 464 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM90A23PA8MXZ1 464 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 ZNF736B4DX44 427 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 ABCD4O14678 606 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 CA11O75493 328 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 CD3DP04234 171 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 TCRBP04435 133 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM90A15PP0C7V4 464 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM90A13PP0C7W8 464 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM90A14PP0C7W9 464 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM90A24PP0C7X0 464 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 CHATP28329 748 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 RBMXP38159 391 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 CBX5P45973 191 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 MZT1Q08AG7 82 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 ZNF154Q13106 437 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 MAB21L1Q13394 359 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 NHLRC3Q5JS37 347 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 SLC22A25Q6T423 547 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 C11orf53Q8IXP5 236 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 NUP37Q8NFH4 326 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 OR4S1Q8NGB4 309 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 OR4C16Q8NGL9 310 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 SNAPC3Q92966 411 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 ZNF488Q96MN9 340 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 NEURL2Q9BR09 285 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 PLK3Q9H4B4 646 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 RHOFQ9HBH0 211 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 MSL2Q9HCI7 577 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 HSF4Q9ULV5 492 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 NUBP2Q9Y5Y2 271 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 IGLV3-9A0A075B6K5 115 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 IGHV3-64DA0A0J9YX35 117 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 PLSCR5A0PG75 271 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 OR7C1O76099 320 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 RAB3DO95716 219 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 GRPP07492 148 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 PRKACAP17612 351 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 MRPS15P82914 257 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 HOXA4Q00056 320 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 BSPH1Q075Z2 132 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 CD300CQ08708 224 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 PDCD1Q15116 288 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 Q6ZPA2 131 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 Q8IYB0 196 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 SCCPDHQ8NBX0 429 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 FBXW5Q969U6 566 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 ESRP2Q9H6T0 727 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 CA10Q9NS85 328 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 NUDT15Q9NV35 164 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 ROS1P08922 2347 aa8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 HRNRQ86YZ3 2850 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 ZNF469Q96JG9 3925 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-223ENST00000627587 ZSCAN5BA6NJL1 495 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 F5H5P2 479 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 INMT-MINDY4F8WBC2 141 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 H3BUI4 141 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 CDIPTO14735 213 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 TPD52L2O43399 206 aaKnown RBP8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 PDCD6O75340 191 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 LY6G6DO95868 133 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 CD74P04233 296 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 ZNF735P0CB33 412 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 NAT1P18440 290 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 FUT3P21217 361 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 HLA-DMAP28067 261 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 ERVK11-1P61568 191 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 CARTPTQ16568 116 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 MPV17LQ2QL34 196 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 SPRNQ5BIV9 151 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 OR52W1Q6IF63 320 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 ZNF782Q6ZMW2 699 aaPredicted RBP8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 BTN2A1Q7KYR7 527 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 LINC00596Q86U02 117 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 KRTAP1-3Q8IUG1 177 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM58AQ8N1B3 248 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 EMG1Q92979 244 aaKnown RBP8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 MRPL24Q96A35 216 aaKnown RBP8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 SMR3AQ99954 134 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 SYT3Q9BQG1 590 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 SULT4A1Q9BR01 284 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 OCSTAMPQ9BR26 566 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 HDHD3Q9BSH5 251 aaPredicted RBP8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 TLNRD1Q9H1K6 362 aa8.02□□□□□ -1.12
PDLIM5-223ENST00000627587 TRAV6A0A075B6T7 132 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 A6NLC8 198 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 M0QYG6 137 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 DHFRP00374 187 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms