RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 KCNIP3Q9Y2W7 256 aa13.96□□□□□ -0.17
LDB3-208ENST00000623007 GVINP1Q7Z2Y8 2422 aa13.96□□□□□ -0.18
LDB3-208ENST00000623007 IGHV2OR16-5A0A0B4J2B6 119 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 IGHV1-18A0A0C4DH31 117 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 A0A1B0GWJ7 208 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 A0A1W2PR80 420 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 PLSCR5A0PG75 271 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 DBX1A6NMT0 343 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 M0R233 179 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 NAPSAO96009 420 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 CRYAAP02489 173 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 GLI4P10075 376 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 SPATA46Q5T0L3 261 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 ZNF660Q6AZW8 331 aaPredicted RBP13.95□□□□□ -0.18
LDB3-208ENST00000623007 TMEM65Q6PI78 240 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 GSG1LQ6UXU4 331 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 RTN4RL2Q86UN3 420 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 SLC38A6Q8IZM9 456 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 NAXEQ8NCW5 288 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 OR11H4Q8NGC9 324 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 SLC23A1Q9UHI7 598 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 K7EM74 188 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 SYNGR1O43759 233 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 TIMM8AO60220 97 aaPredicted RBP13.95□□□□□ -0.18
LDB3-208ENST00000623007 DIRAS3O95661 229 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 IFNA7P01567 189 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 TK1P04183 234 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 SPINK2P20155 84 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 ZNF81P51508 661 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 NAAAQ02083 359 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 RGS7BPQ6MZT1 257 aaPredicted RBP13.95□□□□□ -0.18
LDB3-208ENST00000623007 GFRALQ6UXV0 394 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 MYPOPQ86VE0 399 aaPredicted RBP13.95□□□□□ -0.18
LDB3-208ENST00000623007 CCDC71LQ8N9Z2 235 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 NEK7Q8TDX7 302 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 NMES1Q9C002 83 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 C1orf123Q9NWV4 160 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 ZNF835Q9Y2P0 537 aa13.95□□□□□ -0.18
LDB3-208ENST00000623007 OR5H14A6NHG9 310 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 A8MXE2 369 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 G3V3Q6 166 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 L7N2F9 121 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 SDCBPO00560 298 aaPredicted RBP13.94□□□□□ -0.18
LDB3-208ENST00000623007 SH2D1BO14796 132 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 PGA5P0DJD9 388 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 RPA2P15927 270 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 ERVK11-1P61568 191 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 HERV-K104P61576 105 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 ZNF146Q15072 292 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 LGALSLQ3ZCW2 172 aaPredicted RBP13.94□□□□□ -0.18
LDB3-208ENST00000623007 ZNF474Q6S9Z5 364 aaPredicted RBP13.94□□□□□ -0.18
LDB3-208ENST00000623007 SLC22A25Q6T423 547 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 SCCPDHQ8NBX0 429 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 CCDC120Q96HB5 630 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 NRIP2Q9BQI9 281 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 RTBDNQ9BSG5 229 aaPredicted RBP13.94□□□□□ -0.18
LDB3-208ENST00000623007 TLNRD1Q9H1K6 362 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 FN3KRPQ9HA64 309 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 Q9N2K0 584 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 MEMO1Q9Y316 297 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 BOLA1Q9Y3E2 137 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 ATP23Q9Y6H3 246 aa13.94□□□□□ -0.18
LDB3-208ENST00000623007 DEGS1O15121 323 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 AGFG2O95081 481 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 IFNA2P01563 188 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 PET100P0DJ07 73 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 ZNF728P0DKX0 622 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 SLC25A4P12235 298 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 S100A1P23297 94 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 GLRXP35754 106 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 RBMXP38159 391 aaKnown RBP13.93□□□□□ -0.18
LDB3-208ENST00000623007 KCNJ3P48549 501 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 SELENOVP59797 346 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 GTF3C1Q12789 2109 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 TSC22D1Q15714 1073 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 ABCA11PQ4W5N1 156 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 C17orf107Q6ZR85 190 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 POC1AQ8NBT0 407 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 ADAD2Q8NCV1 583 aaKnown RBP13.93□□□□□ -0.18
LDB3-208ENST00000623007 MOB3AQ96BX8 217 aa13.93□□□□□ -0.18
LDB3-208ENST00000623007 HDHD3Q9BSH5 251 aaPredicted RBP13.93□□□□□ -0.18
LDB3-208ENST00000623007 A0A0D9SG52 128 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 TRDCB7Z8K6 153 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 ZNF154Q13106 437 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 LY6G6FQ5SQ64 297 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 CLEC18BQ6UXF7 455 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 DOLPP1Q86YN1 238 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 Q8NA96 180 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 SUMF2Q8NBJ7 301 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 CASTOR1Q8WTX7 329 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 MAFIPQ8WZ33 124 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 S100PBPQ96BU1 408 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 DPCDQ9BVM2 203 aaPredicted RBP13.92□□□□□ -0.18
LDB3-208ENST00000623007 SUCNR1Q9BXA5 334 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 RASL12Q9NYN1 266 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 CRIM1Q9NZV1 1036 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 PCDHB10Q9UN67 800 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 DCHS1Q96JQ0 3298 aa13.92□□□□□ -0.18
LDB3-208ENST00000623007 ZNHIT1O43257 154 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 LILRA1O75019 489 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms