RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 MAB21L1Q13394 359 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 CDK10Q15131 360 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 ZFP69Q49AA0 526 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 C4orf46Q504U0 113 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 ZNF626Q68DY1 528 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 OR11H7Q8NGC8 314 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 OR52B4Q8NGK2 314 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 NRIP2Q9BQI9 281 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 COQ3Q9NZJ6 369 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 ANXA10Q9UJ72 324 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 ZNF222Q9UK12 451 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 VSIG4Q9Y279 399 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 PLSCR5A0PG75 271 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 OR2AT4A6NND4 320 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 ERVK11-1P61568 191 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 POC1AQ8NBT0 407 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 TERB2Q8NHR7 220 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 GTF3AQ92664 365 aaKnown RBP18.2■□□□□ 0.5
SPAST-204ENST00000621856 MRGPRFQ96AM1 343 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 ZNF286AQ9HBT8 521 aa18.2■□□□□ 0.5
SPAST-204ENST00000621856 CADP27708 2225 aa18.19■□□□□ 0.5
SPAST-204ENST00000621856 A0A1B0GWJ7 208 aa18.19■□□□□ 0.5
SPAST-204ENST00000621856 DPRXA6NFQ7 191 aa18.19■□□□□ 0.5
SPAST-204ENST00000621856 ABCD4O14678 606 aa18.19■□□□□ 0.5
SPAST-204ENST00000621856 DEGS1O15121 323 aa18.19■□□□□ 0.5
SPAST-204ENST00000621856 ZNF44P15621 663 aa18.19■□□□□ 0.5
SPAST-204ENST00000621856 SLC22A25Q6T423 547 aa18.19■□□□□ 0.5
SPAST-204ENST00000621856 FIP1L1Q6UN15 594 aaKnown RBP18.19■□□□□ 0.5
SPAST-204ENST00000621856 ZNF826PQ6ZT77 177 aa18.19■□□□□ 0.5
SPAST-204ENST00000621856 TCTE3Q8IZS6 198 aa18.19■□□□□ 0.5
SPAST-204ENST00000621856 DRAXINQ8NBI3 349 aaPredicted RBP18.19■□□□□ 0.5
SPAST-204ENST00000621856 SUMF2Q8NBJ7 301 aa18.19■□□□□ 0.5
SPAST-204ENST00000621856 NUP37Q8NFH4 326 aa18.19■□□□□ 0.5
SPAST-204ENST00000621856 CAPSLQ8WWF8 208 aa18.19■□□□□ 0.5
SPAST-204ENST00000621856 WFIKKN1Q96NZ8 548 aa18.19■□□□□ 0.5
SPAST-204ENST00000621856 ALX4Q9H161 411 aaPredicted RBP18.19■□□□□ 0.5
SPAST-204ENST00000621856 NGBQ9NPG2 151 aa18.19■□□□□ 0.5
SPAST-204ENST00000621856 UFSP2Q9NUQ7 469 aa18.19■□□□□ 0.5
SPAST-204ENST00000621856 IGLV3-9A0A075B6K5 115 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 HS3ST1O14792 307 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 SULT1A3P0DMM9 295 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 SULT1A4P0DMN0 295 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 C11orf53Q8IXP5 236 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 MARCH1Q8TCQ1 289 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 TLNRD1Q9H1K6 362 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 TAAR3PQ9P1P4 343 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 ATP23Q9Y6H3 246 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 hCG_1807616A0A1W2PRN6 198 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 ZSCAN5BA6NJL1 495 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 ATXN7O15265 892 aaPredicted RBP18.18■□□□□ 0.5
SPAST-204ENST00000621856 ACAA1P09110 424 aaPredicted RBP18.18■□□□□ 0.5
SPAST-204ENST00000621856 OR4E1P0C645 316 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 NKX2-5P52952 324 aaPredicted RBP18.18■□□□□ 0.5
SPAST-204ENST00000621856 BSPH1Q075Z2 132 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 MPPED2Q15777 294 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 GRK1Q15835 563 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 C17orf107Q6ZR85 190 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 OVCH2Q7RTZ1 564 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 RDH5Q92781 318 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 ELMOD3Q96FG2 381 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 MRPL37Q9BZE1 423 aaKnown RBP18.18■□□□□ 0.5
SPAST-204ENST00000621856 MYOZ1Q9NP98 299 aaPredicted RBP18.18■□□□□ 0.5
SPAST-204ENST00000621856 NECAP2Q9NVZ3 263 aa18.18■□□□□ 0.5
SPAST-204ENST00000621856 ATRXP46100 2492 aa18.17■□□□□ 0.5
SPAST-204ENST00000621856 POLEQ07864 2286 aa18.17■□□□□ 0.5
SPAST-204ENST00000621856 NOS1APO75052 506 aaPredicted RBP18.17■□□□□ 0.5
SPAST-204ENST00000621856 CXCL3P19876 107 aa18.17■□□□□ 0.5
SPAST-204ENST00000621856 CD200P41217 278 aa18.17■□□□□ 0.5
SPAST-204ENST00000621856 NPY4RP50391 375 aa18.17■□□□□ 0.5
SPAST-204ENST00000621856 RBM39Q14498 530 aaKnown RBP18.17■□□□□ 0.5
SPAST-204ENST00000621856 Q6P435 159 aa18.17■□□□□ 0.5
SPAST-204ENST00000621856 PCSK4Q6UW60 755 aa18.17■□□□□ 0.5
SPAST-204ENST00000621856 DPCDQ9BVM2 203 aaPredicted RBP18.17■□□□□ 0.5
SPAST-204ENST00000621856 IFT22Q9H7X7 185 aa18.17■□□□□ 0.5
SPAST-204ENST00000621856 TRAV24A0A0B4J272 114 aa18.16■□□□□ 0.5
SPAST-204ENST00000621856 ZZEF1O43149 2961 aa18.16■□□□□ 0.5
SPAST-204ENST00000621856 GLAP06280 429 aa18.16■□□□□ 0.5
SPAST-204ENST00000621856 ANXA3P12429 323 aa18.16■□□□□ 0.5
SPAST-204ENST00000621856 WDR82Q6UXN9 313 aa18.16■□□□□ 0.5
SPAST-204ENST00000621856 ZNF431Q8TF32 576 aaPredicted RBP18.16■□□□□ 0.5
SPAST-204ENST00000621856 MRPL24Q96A35 216 aaKnown RBP18.16■□□□□ 0.5
SPAST-204ENST00000621856 CA10Q9NS85 328 aa18.16■□□□□ 0.5
SPAST-204ENST00000621856 C1orf123Q9NWV4 160 aa18.16■□□□□ 0.5
SPAST-204ENST00000621856 MGAT4CQ9UBM8 478 aa18.16■□□□□ 0.5
SPAST-204ENST00000621856 NKX2-6A6NCS4 301 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 SIRPB1O00241 398 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 SH2D1BO14796 132 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 SPRY3O43610 288 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 ADORA2A-AS1P86434 159 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 SLC25A42Q86VD7 318 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 LHFPL1Q86WI0 220 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 MUC20Q8N307 709 aaPredicted RBP18.15■□□□□ 0.5
SPAST-204ENST00000621856 RNASE6Q93091 150 aaKnown RBP18.15■□□□□ 0.5
SPAST-204ENST00000621856 SCGB3A2Q96PL1 93 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 OR2H2O95918 312 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 OR5H8P0DN80 308 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 FPR2P25090 351 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 FBXL19-AS1Q494R0 122 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 PAN3Q58A45 887 aaKnown RBP18.15■□□□□ 0.5
SPAST-204ENST00000621856 SPIN3Q5JUX0 258 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms