RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 C1orf100Q5SVJ3 147 aa11.8□□□□□ -0.52
CBWD3-217ENST00000621474 AWAT2Q6E213 333 aa11.8□□□□□ -0.52
CBWD3-217ENST00000621474 C22orf42Q6IC83 251 aa11.8□□□□□ -0.52
CBWD3-217ENST00000621474 BTNL3Q6UXE8 466 aa11.8□□□□□ -0.52
CBWD3-217ENST00000621474 NR2C2APQ86WQ0 139 aa11.8□□□□□ -0.52
CBWD3-217ENST00000621474 OR8H2Q8N162 312 aa11.8□□□□□ -0.52
CBWD3-217ENST00000621474 ASCC1Q8N9N2 400 aaKnown RBP11.8□□□□□ -0.52
CBWD3-217ENST00000621474 TBC1D15Q8TC07 691 aa11.8□□□□□ -0.52
CBWD3-217ENST00000621474 METTL9Q9H1A3 318 aa11.8□□□□□ -0.52
CBWD3-217ENST00000621474 OR51E2Q9H255 320 aa11.8□□□□□ -0.52
CBWD3-217ENST00000621474 TXNL4BQ9NX01 149 aaKnown RBP11.8□□□□□ -0.52
CBWD3-217ENST00000621474 STUB1Q9UNE7 303 aa11.8□□□□□ -0.52
CBWD3-217ENST00000621474 AK6Q9Y3D8 172 aaKnown RBP11.8□□□□□ -0.52
CBWD3-217ENST00000621474 A0A0G2JK05 382 aa11.79□□□□□ -0.52
CBWD3-217ENST00000621474 SLC33A1O00400 549 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-217ENST00000621474 SLC22A1O15245 554 aa11.79□□□□□ -0.52
CBWD3-217ENST00000621474 HTR3BO95264 441 aa11.79□□□□□ -0.52
CBWD3-217ENST00000621474 JUNBP17275 347 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-217ENST00000621474 OR3A1P47881 315 aa11.79□□□□□ -0.52
CBWD3-217ENST00000621474 RBM11P57052 281 aaKnown RBP11.79□□□□□ -0.52
CBWD3-217ENST00000621474 CHRFAM7AQ494W8 412 aa11.79□□□□□ -0.52
CBWD3-217ENST00000621474 KLF17Q5JT82 389 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-217ENST00000621474 FIP1L1Q6UN15 594 aaKnown RBP11.79□□□□□ -0.52
CBWD3-217ENST00000621474 TMEM104Q8NE00 496 aa11.79□□□□□ -0.52
CBWD3-217ENST00000621474 OR4S1Q8NGB4 309 aa11.79□□□□□ -0.52
CBWD3-217ENST00000621474 H1FXQ92522 213 aaKnown RBP11.79□□□□□ -0.52
CBWD3-217ENST00000621474 SLC25A28Q96A46 364 aa11.79□□□□□ -0.52
CBWD3-217ENST00000621474 SNX22Q96L94 193 aa11.79□□□□□ -0.52
CBWD3-217ENST00000621474 CHST6Q9GZX3 395 aa11.79□□□□□ -0.52
CBWD3-217ENST00000621474 SIRPDQ9H106 197 aa11.79□□□□□ -0.52
CBWD3-217ENST00000621474 KCNK15Q9H427 330 aa11.79□□□□□ -0.52
CBWD3-217ENST00000621474 EXOSC4Q9NPD3 245 aaKnown RBP11.79□□□□□ -0.52
CBWD3-217ENST00000621474 LPAR3Q9UBY5 353 aa11.79□□□□□ -0.52
CBWD3-217ENST00000621474 AUP1Q9Y679 476 aa11.79□□□□□ -0.52
CBWD3-217ENST00000621474 TRAV1-2A0A0B4J238 106 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 SIRPB1O00241 398 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 SH2D1BO14796 132 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 LIPFP07098 398 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 PPIAL4GP0DN37 164 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 CD36P16671 472 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 GADD45AP24522 165 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 BMXP51813 675 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 CAPZA1P52907 286 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 IL13RA2Q14627 380 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 GLT8D1Q68CQ7 371 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 METAP1DQ6UB28 335 aaPredicted RBP11.78□□□□□ -0.52
CBWD3-217ENST00000621474 TCF23Q7RTU1 214 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 OSR2Q8N2R0 312 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 OR4M1Q8NGD0 313 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 UPRTQ96BW1 309 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 FOXRED1Q96CU9 486 aaPredicted RBP11.78□□□□□ -0.52
CBWD3-217ENST00000621474 TBX15Q96SF7 602 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 BEX2Q9BXY8 128 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 RNF167Q9H6Y7 350 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 ST3GAL6Q9Y274 331 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 TRAV24A0A0B4J272 114 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 GEMIN2O14893 280 aaKnown RBP11.78□□□□□ -0.52
CBWD3-217ENST00000621474 ZNF780AO75290 641 aaPredicted RBP11.78□□□□□ -0.52
CBWD3-217ENST00000621474 CSTBP04080 98 aaKnown RBP11.78□□□□□ -0.52
CBWD3-217ENST00000621474 ZNF44P15621 663 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 HTR2CP28335 458 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 OR10A3P58181 314 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 ARF6P62330 175 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 QRFPP83859 136 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 C11orf42Q8N5U0 333 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 Q8N7P7 452 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 TPRX1Q8N7U7 411 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 YIPF6Q96EC8 236 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 CYYR1Q96J86 154 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 DMRTB1Q96MA1 342 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 S100A13Q99584 98 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 MRI1Q9BV20 369 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 SLITRK2Q9H156 845 aa11.78□□□□□ -0.52
CBWD3-217ENST00000621474 TRBV23-1A0A0A0MS06 115 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 SLC17A2O00624 439 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 FAM157CP0CG43 387 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 VSIG8P0DPA2 414 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 GTF2F2P13984 249 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 HNF1AP20823 631 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 GABRR1P24046 479 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 DLX1P56177 255 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 RPL31P62899 125 aaKnown RBP11.77□□□□□ -0.53
CBWD3-217ENST00000621474 UNC119Q13432 240 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 ZNF273Q14593 569 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 GRK1Q15835 563 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 OR10K2Q6IF99 312 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 CHST4Q8NCG5 386 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 OR6M1Q8NGM8 313 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 WDFY2Q96P53 400 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 CENPOQ9BU64 300 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 PPA2Q9H2U2 334 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 BANF2Q9H503 90 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 IFT22Q9H7X7 185 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 GLS2Q9UI32 602 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 V9GY05 133 aa11.77□□□□□ -0.53
CBWD3-217ENST00000621474 MEX3AA1L020 520 aaKnown RBP11.76□□□□□ -0.53
CBWD3-217ENST00000621474 DEGS1O15121 323 aa11.76□□□□□ -0.53
CBWD3-217ENST00000621474 CSN2P05814 226 aa11.76□□□□□ -0.53
CBWD3-217ENST00000621474 IGHV4-38-2P0DP08 117 aa11.76□□□□□ -0.53
CBWD3-217ENST00000621474 MGMTP16455 207 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms