RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 TMEM171Q8WVE6 324 aa16.95■□□□□ 0.3
PDLIM3-212ENST00000620787 ZNF837Q96EG3 531 aaPredicted RBP16.95■□□□□ 0.3
PDLIM3-212ENST00000620787 KIAA1456Q9P272 454 aa16.95■□□□□ 0.3
PDLIM3-212ENST00000620787 A0A087WWC5 75 aa16.95■□□□□ 0.3
PDLIM3-212ENST00000620787 CDS2O95674 445 aa16.95■□□□□ 0.3
PDLIM3-212ENST00000620787 RD3LP0DJH9 198 aa16.95■□□□□ 0.3
PDLIM3-212ENST00000620787 ZNF343Q6P1L6 599 aa16.95■□□□□ 0.3
PDLIM3-212ENST00000620787 UCN2Q96RP3 112 aa16.95■□□□□ 0.3
PDLIM3-212ENST00000620787 UNKLQ9H9P5 680 aaKnown RBP16.95■□□□□ 0.3
PDLIM3-212ENST00000620787 BCO1Q9HAY6 547 aa16.95■□□□□ 0.3
PDLIM3-212ENST00000620787 NOSIPQ9Y314 301 aaKnown RBP16.95■□□□□ 0.3
PDLIM3-212ENST00000620787 TRDCB7Z8K6 153 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 YKT6O15498 198 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 SLC34A2O95436 690 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 ONECUT2O95948 504 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 CXCL1P09341 107 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 TAGLN2P37802 199 aaKnown RBP16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 RBP2P50120 134 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 NDUFA6P56556 154 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 HERV-K104P61576 105 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 ELOBQ15370 118 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 ZNF600Q6ZNG1 722 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 DOK5Q9P104 306 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 FOXD3Q9UJU5 478 aaPredicted RBP16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 CHCHD2Q9Y6H1 151 aaPredicted RBP16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 C3orf85A0A1B0GTC6 90 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 BTBD17A6NE02 478 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 H0YL77 283 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 OSR2Q8N2R0 312 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 SUMF1Q8NBK3 374 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 NAXEQ8NCW5 288 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 BORCS8Q96FH0 119 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 LIPGQ9Y5X9 500 aa16.94■□□□□ 0.3
PDLIM3-212ENST00000620787 NPIPA2E9PIF3 369 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 NPIPA3F8WFD2 350 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 MPPED1O15442 326 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 UBE2KP61086 200 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 ICAM4Q14773 271 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 CDPF1Q6NVV7 123 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 LHFPL2Q6ZUX7 228 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 SLC25A45Q8N413 288 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 JSRP1Q96MG2 331 aaPredicted RBP16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 TREM2Q9NZC2 230 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 OMGP23515 440 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 NKX2-1P43699 371 aaPredicted RBP16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 DLK1P80370 383 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 C9orf152Q5JTZ5 239 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 ODF3L1Q8IXM7 274 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 SMRP1Q8NCR6 262 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 ULBP2Q9BZM5 246 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 TMEM222Q9H0R3 208 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 GLRX2Q9NS18 164 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 LYRM2Q9NU23 88 aaPredicted RBP16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 TCFL5Q9UL49 500 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 ST3GAL6Q9Y274 331 aa16.93■□□□□ 0.3
PDLIM3-212ENST00000620787 SCAF4O95104 1147 aaKnown RBP16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 PPYP01298 95 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 CEBPGP53567 150 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 ERVFRD-1P60508 538 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 PDCD1Q15116 288 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 RAB35Q15286 201 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 ZNF674Q2M3X9 581 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 FAM27BQ5VT28 67 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 ZNF429Q86V71 674 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 TMEM252Q8N6L7 170 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 ZIC4Q8N9L1 334 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 ZNF610Q8N9Z0 462 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 ZNF700Q9H0M5 742 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 PLEKHF2Q9H8W4 249 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 CCDC85CA6NKD9 419 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 PROB1E7EW31 1015 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 SYNGR3O43761 229 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 SSSCA1O60232 199 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 PDCD6O75340 191 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 NDUFS6O75380 124 aaKnown RBP16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 SRPXP78539 464 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 TMEM42Q69YG0 159 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 MAML2Q8IZL2 1156 aaPredicted RBP16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 CYB561D1Q8N8Q1 229 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 OR6C1Q96RD1 312 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 DEFB126Q9BYW3 111 aa16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 GAR1Q9NY12 217 aaKnown RBP16.92■□□□□ 0.3
PDLIM3-212ENST00000620787 ZNF732B4DXR9 585 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 NRASP01111 189 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 MRPS34P82930 218 aaKnown RBP16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 OR8B8Q15620 311 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 EXT1Q16394 746 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 ZNF506Q5JVG8 444 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 PARPBPQ9NWS1 579 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 IL36GQ9NZH8 169 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 CABIN1Q9Y6J0 2220 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 SCRG1O75711 98 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 EPHA1P21709 976 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 S100A2P29034 98 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 ZNF774Q6NX45 483 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 SPNS3Q6ZMD2 512 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 CADM4Q8NFZ8 388 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 OR5C1Q8NGR4 320 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 TMEM56Q96MV1 263 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 PFDN5Q99471 154 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms