RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 R3HDM4Q96D70 268 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 PPIAL4AQ9Y536 164 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 CTAG2O75638 210 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 S100A8P05109 93 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 PGA3P0DJD8 388 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 COL19A1Q14993 1142 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 ZNF764Q96H86 408 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-219ENST00000620786 CD37P11049 281 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 CD300LDQ6UXZ3 194 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 ETV3LQ6ZN32 361 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 TMEM52Q8NDY8 209 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 NAA60Q9H7X0 242 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 MRM2Q9UI43 246 aaKnown RBP10.01□□□□□ -0.81
CLIP1-219ENST00000620786 SCN4AP35499 1836 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 PRR19A6NJB7 356 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 PPP1R2P9O14990 202 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 TRAPPC2P0DI81 140 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 TRAPPC2BP0DI82 140 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 C21orf58P58505 322 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 ZAR1Q86SH2 424 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 MUC20Q8N307 709 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-219ENST00000620786 TMEM251Q8N6I4 163 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 RAB40CQ96S21 281 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 PIMREGQ9BSJ6 248 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 LPAR3Q9UBY5 353 aa10.01□□□□□ -0.81
CLIP1-219ENST00000620786 GNG7O60262 68 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 SFT2D2O95562 160 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 SLC24A4Q8NFF2 622 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 DTX4Q9Y2E6 619 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 ARL2-SNX15V9GYD0 113 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 TNS1Q9HBL0 1735 aaKnown RBP10□□□□□ -0.81
CLIP1-219ENST00000620786 IGHA1P01876 353 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 IGHA2P01877 340 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 FGF5P12034 268 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 KIAA0141Q14154 515 aaPredicted RBP10□□□□□ -0.81
CLIP1-219ENST00000620786 SLC23A3Q6PIS1 610 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 BAP18Q8IXM2 172 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 OR10Z1Q8NGY1 313 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 MAP6Q96JE9 813 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 CXorf58Q96LI9 332 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 GPR27Q9NS67 375 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 SLC45A2Q9UMX9 530 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 IGKV3-7A0A075B6H7 116 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 BCL2L11O43521 198 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 FABP9Q0Z7S8 132 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 TGIF1Q15583 401 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 CLEC12BQ2HXU8 276 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 ADAMTS17Q8TE56 1095 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 WDR89Q96FK6 387 aaPredicted RBP10□□□□□ -0.81
CLIP1-219ENST00000620786 NKX6-2Q9C056 277 aaPredicted RBP10□□□□□ -0.81
CLIP1-219ENST00000620786 RASL12Q9NYN1 266 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 ZNF629Q9UEG4 869 aaPredicted RBP10□□□□□ -0.81
CLIP1-219ENST00000620786 STARD10Q9Y365 291 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 PCDHGA9Q9Y5G4 932 aaKnown RBP10□□□□□ -0.81
CLIP1-219ENST00000620786 GEMIN2O14893 280 aaKnown RBP10□□□□□ -0.81
CLIP1-219ENST00000620786 PAX5Q02548 391 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 DIRC2Q96SL1 478 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 KCNK15Q9H427 330 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 RGPD3A6NKT7 1758 aaPredicted RBP10□□□□□ -0.81
CLIP1-219ENST00000620786 J3QT63 122 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 GYPAP02724 150 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 HTN1P15515 57 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 FAM162BQ5T6X4 162 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 LINC00299Q6ZSB3 139 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 MYPOPQ86VE0 399 aaPredicted RBP10□□□□□ -0.81
CLIP1-219ENST00000620786 LSMEM1Q8N8F7 131 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 ASB13Q8WXK3 278 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 C10orf35Q96D05 121 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 ZMIZ1Q9ULJ6 1067 aa10□□□□□ -0.81
CLIP1-219ENST00000620786 AHRRA9YTQ3 701 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 OR5AC1P0C628 307 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 FCARP24071 287 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 GAMTQ14353 236 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 ATP1A1-AS1Q5TC04 95 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 ZNF770Q6IQ21 691 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-219ENST00000620786 CCDC190Q86UF4 302 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 RELL2Q8NC24 303 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-219ENST00000620786 C17orf47Q8NEP4 570 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 OR8D4Q8NGM9 314 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 ATP5SQ99766 215 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 PRR33A8MZF0 331 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 CCL8P80075 99 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 HOXA4Q00056 320 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-219ENST00000620786 BAK1Q16611 211 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 PLPPR5Q32ZL2 321 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 ZNF528Q3MIS6 628 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 NHLRC2Q8NBF2 726 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 OR2J1Q9GZK6 312 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 MCM3APO60318 1980 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 SCN1AP35498 2009 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 PRSS44E7EML9 344 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 TCAPO15273 167 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 DNPH1O43598 174 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 KLRB1Q12918 225 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 FAM214BQ7L5A3 538 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 SIGLECL1Q8N7X8 197 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 OR10A7Q8NGE5 316 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 ABHD14AQ9BUJ0 271 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 NEU3Q9UQ49 428 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 RFPL4AA6NLU0 287 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms