RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 MBD2Q9UBB5 411 aa15.01□□□□□ -0.01
CNOT3-209ENST00000617930 F5H0A9 414 aaPredicted RBP15□□□□□ -0.01
CNOT3-209ENST00000617930 CST4P01036 141 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 AMY2BP19961 511 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 NPY4RP50391 375 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 GPM6AP51674 278 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 ACSF3Q4G176 576 aaPredicted RBP15□□□□□ -0.01
CNOT3-209ENST00000617930 PRR30Q53SZ7 412 aaPredicted RBP15□□□□□ -0.01
CNOT3-209ENST00000617930 SPATA46Q5T0L3 261 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 TMEM17Q86X19 198 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 OSR2Q8N2R0 312 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 SLC30A7Q8NEW0 376 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 TMEM230Q96A57 120 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 C5orf66Q9H5L9 145 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 ST3GAL6Q9Y274 331 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 C13orf42A0A1B0GVH6 325 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 CD300LBA8K4G0 201 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 CEACAM18A8MTB9 384 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 CA11O75493 328 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 DUS4LO95620 317 aaKnown RBP15□□□□□ -0.01
CNOT3-209ENST00000617930 APLNRP35414 380 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 GABRA6Q16445 453 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 ACTBL2Q562R1 376 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 RTL6Q6ICC9 239 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 ZSCAN4Q8NAM6 433 aaPredicted RBP15□□□□□ -0.01
CNOT3-209ENST00000617930 SARAFQ96BY9 339 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 ARPC5LQ9BPX5 153 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 DNTTIP1Q9H147 329 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 LIME1Q9H400 295 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 GLRX2Q9NS18 164 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 HSF4Q9ULV5 492 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 GPR132Q9UNW8 380 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 OSGIN2Q9Y236 505 aa15□□□□□ -0.01
CNOT3-209ENST00000617930 CBX5P45973 191 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 MALLQ13021 153 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 SNTB1Q13884 538 aaKnown RBP14.99□□□□□ -0.01
CNOT3-209ENST00000617930 CEACAM21Q3KPI0 293 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 CCDC36Q8IYA8 594 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 CNEP1R1Q8N9A8 125 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 CSNK2A3Q8NEV1 391 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 Q8NFD4 153 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 CHMP1AQ9HD42 196 aaPredicted RBP14.99□□□□□ -0.01
CNOT3-209ENST00000617930 IL36RNQ9UBH0 155 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 FAM221AA4D161 298 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 PI3P19957 117 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 IL32P24001 234 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 SERPINF1P36955 418 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 HAAOP46952 286 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 ERVS71-1P61550 626 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 ZNF273Q14593 569 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 Q6ZT83 130 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 ARRDC1Q8N5I2 433 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 OR5AP2Q8NGF4 316 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 OR5H2Q8NGV7 314 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 DCUN1D4Q92564 292 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 CPNE2Q96FN4 548 aaPredicted RBP14.99□□□□□ -0.01
CNOT3-209ENST00000617930 TECTBQ96PL2 329 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 RTBDNQ9BSG5 229 aaPredicted RBP14.99□□□□□ -0.01
CNOT3-209ENST00000617930 BARX1Q9HBU1 254 aaPredicted RBP14.99□□□□□ -0.01
CNOT3-209ENST00000617930 ZNF701Q9NV72 531 aaPredicted RBP14.99□□□□□ -0.01
CNOT3-209ENST00000617930 MTCH1Q9NZJ7 389 aa14.99□□□□□ -0.01
CNOT3-209ENST00000617930 ATRXP46100 2492 aa14.98□□□□□ -0.01
CNOT3-209ENST00000617930 INTS1Q8N201 2190 aaKnown RBP14.98□□□□□ -0.01
CNOT3-209ENST00000617930 BCL3P20749 454 aa14.98□□□□□ -0.01
CNOT3-209ENST00000617930 OPRM1P35372 400 aa14.98□□□□□ -0.01
CNOT3-209ENST00000617930 TDGF1P3P51864 188 aa14.98□□□□□ -0.01
CNOT3-209ENST00000617930 RBM11P57052 281 aaKnown RBP14.98□□□□□ -0.01
CNOT3-209ENST00000617930 OR2T2Q6IF00 324 aa14.98□□□□□ -0.01
CNOT3-209ENST00000617930 ZNF585AQ6P3V2 769 aa14.98□□□□□ -0.01
CNOT3-209ENST00000617930 PEG10Q86TG7 708 aaKnown RBP14.98□□□□□ -0.01
CNOT3-209ENST00000617930 ZDHHC23Q8IYP9 409 aa14.98□□□□□ -0.01
CNOT3-209ENST00000617930 CISD2Q8N5K1 135 aaKnown RBP14.98□□□□□ -0.01
CNOT3-209ENST00000617930 WNT2BQ93097 391 aa14.98□□□□□ -0.01
CNOT3-209ENST00000617930 SLAMF9Q96A28 289 aa14.98□□□□□ -0.01
CNOT3-209ENST00000617930 FAM215AQ9Y5M1 114 aa14.98□□□□□ -0.01
CNOT3-209ENST00000617930 ZNF732B4DXR9 585 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 NUPL2O15504 423 aaKnown RBP14.97□□□□□ -0.01
CNOT3-209ENST00000617930 TNFSF13O75888 250 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 ZNF205O95201 554 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 CRHP06850 196 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 PSMB6P28072 239 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 PAN3Q58A45 887 aaKnown RBP14.97□□□□□ -0.01
CNOT3-209ENST00000617930 UNQ6126/PRO20091Q6UXV3 157 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 DPPA2Q7Z7J5 298 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 WDR31Q8NA23 367 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 TMEM185AQ8NFB2 350 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 OR5P3Q8WZ94 311 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 NARS2Q96I59 477 aaKnown RBP14.97□□□□□ -0.01
CNOT3-209ENST00000617930 EHFQ9NZC4 300 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 PRELID1Q9Y255 219 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 MED19A0JLT2 244 aaPredicted RBP14.97□□□□□ -0.01
CNOT3-209ENST00000617930 SYNGR1O43759 233 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 IDH3GP51553 393 aaPredicted RBP14.97□□□□□ -0.01
CNOT3-209ENST00000617930 DEFA5Q01523 94 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 MARS2Q96GW9 593 aaKnown RBP14.97□□□□□ -0.01
CNOT3-209ENST00000617930 MICU1Q9BPX6 476 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 PRR13Q9NZ81 148 aa14.97□□□□□ -0.01
CNOT3-209ENST00000617930 ITPR1Q14643 2758 aa14.96□□□□□ -0.01
CNOT3-209ENST00000617930 DBX1A6NMT0 343 aa14.96□□□□□ -0.01
CNOT3-209ENST00000617930 CGAP01215 116 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms