RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ATP5G2Q06055 141 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 ZNF415Q09FC8 603 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 DUSP5Q16690 384 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 PRSS36Q5K4E3 855 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 FAM71E1Q6IPT2 247 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 SCD5Q86SK9 330 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 OR4X1Q8NH49 305 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 MS4A4AQ96JQ5 239 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 PRSS37A4D1T9 235 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 UPK1AO00322 258 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 CGB3P0DN86 165 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 CTSSP25774 331 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 TMEM189-UBE2V1I3L0A0 370 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 RBFOX2O43251 390 aaKnown RBP eCLIP11.26□□□□□ -0.61
TCF4-248ENST00000616053 PDCD1Q15116 288 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 KIR3DL3Q8N743 410 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 MS4A10Q96PG2 267 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 ZDHHC8Q9ULC8 765 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 ADAP1O75689 374 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 CEACAM8P31997 349 aaPredicted RBP11.26□□□□□ -0.61
TCF4-248ENST00000616053 CDKN2AP42771 156 aaKnown RBP11.26□□□□□ -0.61
TCF4-248ENST00000616053 C1orf185Q5T7R7 199 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 PRNTQ86SH4 94 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 COL25A1Q9BXS0 654 aaPredicted RBP11.26□□□□□ -0.61
TCF4-248ENST00000616053 METRNQ9UJH8 293 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 MMP24Q9Y5R2 645 aa11.26□□□□□ -0.61
TCF4-248ENST00000616053 PRKNO60260 465 aaPredicted RBP11.25□□□□□ -0.61
TCF4-248ENST00000616053 RPS4Y1P22090 263 aaKnown RBP11.25□□□□□ -0.61
TCF4-248ENST00000616053 NCCRP1Q6ZVX7 275 aaPredicted RBP11.25□□□□□ -0.61
TCF4-248ENST00000616053 CISD1Q9NZ45 108 aaKnown RBP11.25□□□□□ -0.61
TCF4-248ENST00000616053 NTMQ9P121 344 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 R4GMQ9 66 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 AKR7A2O43488 359 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 S1PR2O95136 353 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 SLC38A11Q08AI6 406 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 TOMM34Q15785 309 aaPredicted RBP11.25□□□□□ -0.61
TCF4-248ENST00000616053 ZNF691Q5VV52 312 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 C10orf113Q5VZT2 155 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 TP53I13Q8NBR0 393 aaPredicted RBP11.25□□□□□ -0.61
TCF4-248ENST00000616053 OR2A5Q96R48 311 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 IGSF5Q9NSI5 407 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 PPIAL4EA0A075B759 164 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 PCNX2A6NKB5 2137 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 PPIAL4DF5H284 164 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 GIPP09681 153 aaPredicted RBP11.25□□□□□ -0.61
TCF4-248ENST00000616053 PPIAL4FP0DN26 164 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 RPL18Q07020 188 aaKnown RBP11.25□□□□□ -0.61
TCF4-248ENST00000616053 TCTEX1D1Q8N7M0 179 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 PCYT2Q99447 389 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 NAT8Q9UHE5 227 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 PPIAL4AQ9Y536 164 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 SIX6O95475 246 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 LHX3Q9UBR4 397 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 DAPP1Q9UN19 280 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 HRH1P35367 487 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 GBGT1Q8N5D6 347 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 PHYHIPQ92561 330 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 WDR89Q96FK6 387 aaPredicted RBP11.25□□□□□ -0.61
TCF4-248ENST00000616053 GMPR2Q9P2T1 348 aaKnown RBP11.25□□□□□ -0.61
TCF4-248ENST00000616053 HSPB8Q9UJY1 196 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 SIAH3Q8IW03 269 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 PREX2Q70Z35 1606 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 IGHV4-34P06331 123 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 DLX6P56179 175 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 METRNLQ641Q3 311 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 Q6ZS52 159 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 C19orf43Q9BQ61 176 aa11.25□□□□□ -0.61
TCF4-248ENST00000616053 LYRM2Q9NU23 88 aaPredicted RBP11.25□□□□□ -0.61
TCF4-248ENST00000616053 TECRQ9NZ01 308 aaKnown RBP11.25□□□□□ -0.61
TCF4-248ENST00000616053 LILRA1O75019 489 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 S100A11P31949 105 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 REG1BP48304 166 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 HIST3H3Q16695 136 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 C16orf52Q8NHV5 167 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 GPX1P07203 203 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 C12orf54Q6X4T0 127 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 UNC13CQ8NB66 2214 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 IGHV3OR15-7A0A075B7D8 119 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 SPI1P17947 270 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 CCR6P51684 374 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 C3AR1Q16581 482 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 ZNF485Q8NCK3 441 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 EGLN2Q96KS0 407 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 ERCC6L2Q5T890 1561 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 OR5B21A6NL26 309 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 J3QW42 95 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 PABPC1L2AQ5JQF8 200 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 LDLRAD1Q5T700 205 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 SAMD13Q5VXD3 122 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 TSPAN32Q96QS1 320 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 TMEM167BQ9NRX6 74 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 CLTCL1P53675 1640 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 WNT7AO00755 349 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 CD80P33681 288 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 SRSF5Q13243 272 aaKnown RBP11.24□□□□□ -0.61
TCF4-248ENST00000616053 SLCO4C1Q6ZQN7 724 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 MRGPRGQ86SM5 289 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 MYO5BQ9ULV0 1848 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 PDE6DO43924 150 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 ZNF324BQ6AW86 544 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms