RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 PDZK1IP1Q13113 114 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 MIDNQ504T8 468 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 RPL7L1Q6DKI1 246 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 RXFP4Q8TDU9 374 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 AQP3Q92482 292 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 TMEM54Q969K7 222 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF837Q96EG3 531 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 PRRX2Q99811 253 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 BIN3Q9NQY0 253 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 PSG11Q9UQ72 335 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 KIF26AQ9ULI4 1882 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 TRAV17A0A0B4J275 112 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 LNP1A1A4G5 178 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 KRASP01116 189 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 IFI6P09912 130 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 RCC1P18754 421 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 IGSF11Q5DX21 431 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 SLC23A3Q6PIS1 610 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 NUFIP2Q7Z417 695 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 OR10Z1Q8NGY1 313 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 OR6S1Q8NH40 331 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 GFI1Q99684 422 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 GABRA4P48169 554 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 TMEM105Q8N8V8 129 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 OR10X1Q8NGY0 326 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 SLC25A40Q8TBP6 338 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 MALSU1Q96EH3 234 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 LPAR5Q9H1C0 372 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 TAAR3PQ9P1P4 343 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 TMEM30CPA0ZSE6 113 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF891A8MT65 544 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 SMIM21Q3B7S5 101 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF362Q5T0B9 420 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 LYZL2Q7Z4W2 148 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 PPP1R32Q7Z5V6 425 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 NFAM1Q8NET5 270 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 CCL28Q9NRJ3 127 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 SLC7A10Q9NS82 523 aa7.78□□□□□ -1.16
PDLIM5-222ENST00000615540 FIGNL2A6NMB9 653 aa7.77□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF250P15622 560 aa7.77□□□□□ -1.16
PDLIM5-222ENST00000615540 FGF7P21781 194 aa7.77□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF485Q8NCK3 441 aa7.77□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF426Q9BUY5 554 aa7.77□□□□□ -1.16
PDLIM5-222ENST00000615540 PRELID3BQ9Y3B1 194 aa7.77□□□□□ -1.16
PDLIM5-222ENST00000615540 FAM90A27PA6NNH2 459 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 ISG15P05161 165 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 EFNB1P98172 346 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 MPPED2Q15777 294 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 Q3ZCU0 254 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 HIST2H3PS2Q5TEC6 136 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 NMES1Q9C002 83 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 TRIM64BA6NI03 449 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 GPR37O15354 613 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 TRAF3IP2O43734 574 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 FTH1P19P0C7X4 201 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 EIF2S3P41091 472 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 LPAR6P43657 344 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 OR3A1P47881 315 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 PDZD11Q5EBL8 140 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 SOHLH1Q5JUK2 328 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 AVPI1Q5T686 147 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 FBXL17Q9UF56 701 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 FGF8P55075 233 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 ZP1P60852 638 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 POLR2GP62487 172 aaKnown RBP eCLIP7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 UBE2V2Q15819 145 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 MSI2Q96DH6 328 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 OR2J1Q9GZK6 312 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 RGS13O14921 159 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 FAM122CQ6P4D5 195 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 C1QL2Q7Z5L3 287 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 BOD1Q96IK1 185 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 SLC26A1Q9H2B4 701 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 PLEKHA2Q9HB19 425 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 MSL2Q9HCI7 577 aa7.77□□□□□ -1.17
PDLIM5-222ENST00000615540 TRDCB7Z8K6 153 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 HAND1O96004 215 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 PMELP40967 661 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 DYNLT3P51808 116 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 UBE2G2P60604 165 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 OR5AC2Q9NZP5 309 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 SYNGR1O43759 233 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 MT-CO2P00403 227 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 GP1BAP07359 652 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 FCGR3AP08637 254 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 H2BFSP57053 126 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 ZNF154Q13106 437 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 CLEC12BQ2HXU8 276 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 FAM27BQ5VT28 67 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 PINX1Q96BK5 328 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 ADGRG7Q96K78 797 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 NGBQ9NPG2 151 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 C7orf66A4D0T2 115 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 DFFBO76075 338 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 KITLGP21583 273 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 ZBTB25P24278 435 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 NDUFA6P56556 154 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 PRSS54Q6PEW0 395 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 HOGA1Q86XE5 327 aa7.76□□□□□ -1.17
PDLIM5-222ENST00000615540 OR5C1Q8NGR4 320 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms