RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ZNF141Q15928 474 aa9.52□□□□□ -0.88
FAM3A-221ENST00000612856 SPACA3Q8IXA5 215 aa9.52□□□□□ -0.88
FAM3A-221ENST00000612856 RFESDQ8TAC1 157 aa9.52□□□□□ -0.88
FAM3A-221ENST00000612856 MARCH1Q8TCQ1 289 aa9.52□□□□□ -0.88
FAM3A-221ENST00000612856 TMEM59Q9BXS4 323 aa9.52□□□□□ -0.88
FAM3A-221ENST00000612856 TNFRSF19Q9NS68 423 aa9.52□□□□□ -0.88
FAM3A-221ENST00000612856 KLF2Q9Y5W3 355 aaPredicted RBP9.52□□□□□ -0.88
FAM3A-221ENST00000612856 PCDH15Q96QU1 1955 aa9.52□□□□□ -0.88
FAM3A-221ENST00000612856 TRAV14DV4A0A0A6YYC5 116 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 ZNF705FA8MVS1 300 aaPredicted RBP9.52□□□□□ -0.89
FAM3A-221ENST00000612856 ENSAO43768 121 aaKnown RBP9.52□□□□□ -0.89
FAM3A-221ENST00000612856 ZNF705DP0CH99 300 aaPredicted RBP9.52□□□□□ -0.89
FAM3A-221ENST00000612856 ZNF705BP0CI00 300 aaPredicted RBP9.52□□□□□ -0.89
FAM3A-221ENST00000612856 DDTP30046 118 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 ACAA2P42765 397 aaKnown RBP9.52□□□□□ -0.89
FAM3A-221ENST00000612856 HIST2H3PS2Q5TEC6 136 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 GVQW1Q8N7I0 195 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 PRSS33Q8NF86 280 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 CMBLQ96DG6 245 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 MEMO1Q9Y316 297 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 NUP210Q8TEM1 1887 aaPredicted RBP9.52□□□□□ -0.89
FAM3A-221ENST00000612856 C5orf52A6NGY3 159 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 XRCC3O43542 346 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 NXPH3O95157 252 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 WNT11O96014 354 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 SMIM10L1P0DMW3 83 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 SULT1A1P50225 295 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 MIDNQ504T8 468 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 ATPAF1Q5TC12 328 aaPredicted RBP9.52□□□□□ -0.89
FAM3A-221ENST00000612856 DHRS11Q6UWP2 260 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 DMRTC2Q8IXT2 367 aaPredicted RBP9.52□□□□□ -0.89
FAM3A-221ENST00000612856 OR51F2Q8NH61 342 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 SMIM10Q96HG1 83 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 DDA1Q9BW61 102 aa9.52□□□□□ -0.89
FAM3A-221ENST00000612856 K7EPK0 472 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 PLPP3O14495 311 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 SLC31A2O15432 143 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 KLK2P20151 261 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 RBMXP38159 391 aaKnown RBP9.51□□□□□ -0.89
FAM3A-221ENST00000612856 CYCSP99999 105 aaKnown RBP9.51□□□□□ -0.89
FAM3A-221ENST00000612856 NHLH1Q02575 133 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 FAM71E2Q8N5Q1 922 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 SLC30A7Q8NEW0 376 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 PRRT1Q99946 306 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 RTN4RQ9BZR6 473 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 TUBG2Q9NRH3 451 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 HEATR5AQ86XA9 2040 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 COLCA2A8K830 154 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 GALP22466 123 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 OMGP23515 440 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 ASCL1P50553 236 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 ATG4DQ86TL0 474 aaPredicted RBP9.51□□□□□ -0.89
FAM3A-221ENST00000612856 OR8U1Q8NH10 309 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 KLHDC3Q9BQ90 382 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 SLC7A10Q9NS82 523 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 RCC2Q9P258 522 aaKnown RBP9.51□□□□□ -0.89
FAM3A-221ENST00000612856 C14orf166Q9Y224 244 aaKnown RBP9.51□□□□□ -0.89
FAM3A-221ENST00000612856 UBE2J1Q9Y385 318 aaPredicted RBP9.51□□□□□ -0.89
FAM3A-221ENST00000612856 ARFGEF3Q5TH69 2177 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 TRAV8-7A0A075B6U6 113 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 MEGF11A6BM72 1044 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 GPM6AP51674 278 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 ACSM1Q08AH1 577 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 RAB35Q15286 201 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 HAGHQ16775 308 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 ZNF385CQ66K41 422 aaPredicted RBP9.51□□□□□ -0.89
FAM3A-221ENST00000612856 CDPF1Q6NVV7 123 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 MRPL41Q8IXM3 137 aaKnown RBP9.51□□□□□ -0.89
FAM3A-221ENST00000612856 OR51A4Q8NGJ6 313 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 ASB17Q8WXJ9 295 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 EMG1Q92979 244 aaKnown RBP9.51□□□□□ -0.89
FAM3A-221ENST00000612856 PHYHIPLQ96FC7 376 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 PIK3IP1Q96FE7 263 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 REEP6Q96HR9 211 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 PBDC1Q9BVG4 233 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 LPAR3Q9UBY5 353 aa9.51□□□□□ -0.89
FAM3A-221ENST00000612856 LIPT2A6NK58 231 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 SDCBPO00560 298 aaPredicted RBP9.5□□□□□ -0.89
FAM3A-221ENST00000612856 CTDSPLO15194 276 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 PIN1P1O15428 100 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 SCGB1D1O95968 90 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 RNF151Q2KHN1 245 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 NOXO1Q8NFA2 376 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 OR56B2PQ8NGI1 322 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 LRP12Q9Y561 859 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 WDR1O75083 606 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 KLF7O75840 302 aaPredicted RBP9.5□□□□□ -0.89
FAM3A-221ENST00000612856 IFNA21P01568 189 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 HTR2CP28335 458 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 HRH1P35367 487 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 HES1Q14469 280 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 GUK1Q16774 197 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 ZNF485Q8NCK3 441 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 OR4A4PQ8NGN8 299 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 OR5H2Q8NGV7 314 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 ADIPOR1Q96A54 375 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 DOK5Q9P104 306 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 PRSS50Q9UI38 385 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 CTAG2O75638 210 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 IGHV2-70P01814 119 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms