RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 GTF3C1Q12789 2109 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 ARGFXA6NJG6 315 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 ZNF705EA8MWA4 302 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 BET1O15155 118 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 RRP8O43159 456 aaKnown RBP12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 PDCD6O75340 191 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 SYNGR4O95473 234 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 CTAG1AP78358 180 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 HOXA4Q00056 320 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 MALLQ13021 153 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 MST1LQ2TV78 715 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 TMEM164Q5U3C3 297 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 TFAP2EQ6VUC0 442 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 MYPOPQ86VE0 399 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 SLC30A7Q8NEW0 376 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 OR4A4PQ8NGN8 299 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 MARC2Q969Z3 335 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 CNTNAP3BQ96NU0 1288 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 ZPBPQ9BS86 351 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 CNTNAP3Q9BZ76 1288 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 MTCH1Q9NZJ7 389 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 KIAA2026Q5HYC2 2103 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 IGKV3D-15A0A087WSY6 115 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 TRAV39A0A0B4J263 110 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 ZNF732B4DXR9 585 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 NXPH3O95157 252 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 SCTP09683 121 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 ZNF273Q14593 569 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 MRPL21Q7Z2W9 205 aaKnown RBP12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 STOML3Q8TAV4 291 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 TMEM45BQ96B21 275 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 APH1AQ96BI3 265 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 PHYHIPLQ96FC7 376 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 B4GALT7Q9UBV7 327 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 DIDO1Q9BTC0 2240 aaKnown RBP12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 IL32P24001 234 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 TMEM187Q14656 261 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 TMEM88Q6PEY1 159 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 COLCA1Q6ZS62 124 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 EXTL1Q92935 676 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 AQP10Q96PS8 301 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 TP53RKQ96S44 253 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 REPIN1Q9BWE0 567 aaKnown RBP12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 PRDM14Q9GZV8 571 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 FBXL17Q9UF56 701 aa12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 MRPS18CQ9Y3D5 142 aaKnown RBP12.1□□□□□ -0.47
PCDHGA3-202ENST00000612467 PHF1O43189 567 aaPredicted RBP12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 FGF16O43320 207 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 CA11O75493 328 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 MBPP02686 304 aaPredicted RBP12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 LYL1P12980 280 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 RPL12P30050 165 aaKnown RBP12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 SURF2Q15527 256 aaPredicted RBP12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 DHRS11Q6UWP2 260 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 ZNF100Q8IYN0 542 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 SUMF1Q8NBK3 374 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 UBALD1Q8TB05 177 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 SPSB4Q96A44 273 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 NAA60Q9H7X0 242 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 RFNGQ9Y644 331 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 SMG1Q96Q15 3661 aaKnown RBP12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 SP1P08047 785 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 CELA3BP08861 270 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 ZNF883P0CG24 379 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 SELEP16581 610 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 WNT5AP41221 380 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 LPAR6P43657 344 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 ARL6IP1Q15041 203 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 ZNF528Q3MIS6 628 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 NEK7Q8TDX7 302 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 GLYATL2Q8WU03 294 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 RGCCQ9H4X1 137 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 ZNF286AQ9HBT8 521 aa12.09□□□□□ -0.47
PCDHGA3-202ENST00000612467 MAP1BP46821 2468 aaKnown RBP12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 PQLC2LA1A4F0 135 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 DNASE2O00115 360 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 FUT3P21217 361 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 DTYMKP23919 212 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 TMEM33P57088 247 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 PLA2G2CQ5R387 149 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 HAGHLQ6PII5 290 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 C20orf204Q6ZNR8 217 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 CCDC54Q8NEL0 328 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 DECR2Q9NUI1 292 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 SPRR3Q9UBC9 169 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 ZDHHC8Q9ULC8 765 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 EDARQ9UNE0 448 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 AMDHD2Q9Y303 409 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 K7EPK0 472 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 HS3ST1O14792 307 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 TNFSF12O43508 249 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 PPA1Q15181 289 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 OR2T2Q6IF00 324 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 GCNT2Q8N0V5 402 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 FAM71E2Q8N5Q1 922 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 SECTM1Q8WVN6 248 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 LDAHQ9H6V9 325 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 TAF9BQ9HBM6 251 aa12.08□□□□□ -0.48
PCDHGA3-202ENST00000612467 IGKV1D-13A0A0B4J2D9 117 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 DEDDO75618 318 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms